Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
LRIT1Q9P2V4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.19■■□□□ 1.94
LRIT1Q9P2V4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
LRIT1Q9P2V4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
LRIT1Q9P2V4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.18■■□□□ 1.94
LRIT1Q9P2V4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
LRIT1Q9P2V4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.16■■□□□ 1.94
LRIT1Q9P2V4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
LRIT1Q9P2V4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
LRIT1Q9P2V4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.15■■□□□ 1.94
LRIT1Q9P2V4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
LRIT1Q9P2V4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.14■■□□□ 1.94
LRIT1Q9P2V4 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.13■■□□□ 1.93
LRIT1Q9P2V4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.13■■□□□ 1.93
LRIT1Q9P2V4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
LRIT1Q9P2V4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
LRIT1Q9P2V4 CAHM-201ENST00000604200 896 ntBASIC27.12■■□□□ 1.93
LRIT1Q9P2V4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
LRIT1Q9P2V4 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
LRIT1Q9P2V4 AL133380.1-201ENST00000506013 324 ntBASIC27.11■■□□□ 1.93
LRIT1Q9P2V4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
LRIT1Q9P2V4 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
LRIT1Q9P2V4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.05■■□□□ 1.92
LRIT1Q9P2V4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.03■■□□□ 1.92
LRIT1Q9P2V4 AL391121.1-201ENST00000607967 1349 ntBASIC27.03■■□□□ 1.92
LRIT1Q9P2V4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
LRIT1Q9P2V4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
LRIT1Q9P2V4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.99■■□□□ 1.91
LRIT1Q9P2V4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
LRIT1Q9P2V4 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
LRIT1Q9P2V4 RPS2P35-201ENST00000443417 897 ntBASIC26.99■■□□□ 1.91
LRIT1Q9P2V4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.98■■□□□ 1.91
LRIT1Q9P2V4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
LRIT1Q9P2V4 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
LRIT1Q9P2V4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.97■■□□□ 1.91
LRIT1Q9P2V4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.95■■□□□ 1.9
LRIT1Q9P2V4 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
LRIT1Q9P2V4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.92■■□□□ 1.9
LRIT1Q9P2V4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
LRIT1Q9P2V4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
LRIT1Q9P2V4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
LRIT1Q9P2V4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.87■■□□□ 1.89
LRIT1Q9P2V4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
LRIT1Q9P2V4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
LRIT1Q9P2V4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
LRIT1Q9P2V4 AP006261.1-201ENST00000584783 668 ntBASIC26.82■■□□□ 1.88
LRIT1Q9P2V4 AL162393.1-201ENST00000437852 946 ntBASIC26.81■■□□□ 1.88
LRIT1Q9P2V4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.79■■□□□ 1.88
LRIT1Q9P2V4 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.78■■□□□ 1.88
LRIT1Q9P2V4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
LRIT1Q9P2V4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.77■■□□□ 1.88
LRIT1Q9P2V4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.76■■□□□ 1.88
LRIT1Q9P2V4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.75■■□□□ 1.87
LRIT1Q9P2V4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
LRIT1Q9P2V4 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
LRIT1Q9P2V4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.74■■□□□ 1.87
LRIT1Q9P2V4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.74■■□□□ 1.87
LRIT1Q9P2V4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
LRIT1Q9P2V4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
LRIT1Q9P2V4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
LRIT1Q9P2V4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
LRIT1Q9P2V4 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
LRIT1Q9P2V4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
LRIT1Q9P2V4 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
LRIT1Q9P2V4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.7■■□□□ 1.87
LRIT1Q9P2V4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
LRIT1Q9P2V4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
LRIT1Q9P2V4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
LRIT1Q9P2V4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.67■■□□□ 1.86
LRIT1Q9P2V4 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.67■■□□□ 1.86
LRIT1Q9P2V4 MIR3665-201ENST00000578708 105 ntBASIC26.66■■□□□ 1.86
LRIT1Q9P2V4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.65■■□□□ 1.86
LRIT1Q9P2V4 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
LRIT1Q9P2V4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
LRIT1Q9P2V4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.64■■□□□ 1.86
LRIT1Q9P2V4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
LRIT1Q9P2V4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
LRIT1Q9P2V4 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.62■■□□□ 1.85
LRIT1Q9P2V4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
LRIT1Q9P2V4 MIR762-201ENST00000390236 83 ntBASIC26.61■■□□□ 1.85
LRIT1Q9P2V4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
LRIT1Q9P2V4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
LRIT1Q9P2V4 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
LRIT1Q9P2V4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
LRIT1Q9P2V4 WASH5P-204ENST00000632292 975 ntBASIC26.58■■□□□ 1.85
LRIT1Q9P2V4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
LRIT1Q9P2V4 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.56■■□□□ 1.84
LRIT1Q9P2V4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LRIT1Q9P2V4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
LRIT1Q9P2V4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
LRIT1Q9P2V4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
LRIT1Q9P2V4 DUX4L28-201ENST00000623687 678 ntBASIC26.55■■□□□ 1.84
LRIT1Q9P2V4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.55■■□□□ 1.84
LRIT1Q9P2V4 AC005559.1-201ENST00000589661 871 ntBASIC26.54■■□□□ 1.84
LRIT1Q9P2V4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.52■■□□□ 1.84
LRIT1Q9P2V4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.52■■□□□ 1.84
LRIT1Q9P2V4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.52■■□□□ 1.84
LRIT1Q9P2V4 AC087741.3-201ENST00000624270 1347 ntBASIC26.51■■□□□ 1.83
LRIT1Q9P2V4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LRIT1Q9P2V4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms