Protein–RNA interactions for Protein: Q9HCB6

SPON1, Spondin-1, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPON1Q9HCB6 AC087741.3-201ENST00000624270 1347 ntBASIC36.61■■■■□ 3.45
SPON1Q9HCB6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC36.61■■■■□ 3.45
SPON1Q9HCB6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC36.6■■■■□ 3.45
SPON1Q9HCB6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC36.6■■■■□ 3.45
SPON1Q9HCB6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC36.59■■■■□ 3.45
SPON1Q9HCB6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC36.58■■■■□ 3.45
SPON1Q9HCB6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC36.55■■■■□ 3.44
SPON1Q9HCB6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC36.54■■■■□ 3.44
SPON1Q9HCB6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC36.52■■■■□ 3.44
SPON1Q9HCB6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC36.51■■■■□ 3.44
SPON1Q9HCB6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC36.51■■■■□ 3.44
SPON1Q9HCB6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC36.51■■■■□ 3.44
SPON1Q9HCB6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC36.5■■■■□ 3.43
SPON1Q9HCB6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC36.47■■■■□ 3.43
SPON1Q9HCB6 AC044849.2-201ENST00000606596 710 ntBASIC36.47■■■■□ 3.43
SPON1Q9HCB6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC36.47■■■■□ 3.43
SPON1Q9HCB6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC36.42■■■■□ 3.42
SPON1Q9HCB6 DUX4L28-201ENST00000623687 678 ntBASIC36.41■■■■□ 3.42
SPON1Q9HCB6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC36.4■■■■□ 3.42
SPON1Q9HCB6 ZNRF2P2-203ENST00000454624 420 ntBASIC36.39■■■■□ 3.42
SPON1Q9HCB6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC36.37■■■■□ 3.41
SPON1Q9HCB6 EBPL-202ENST00000378268 680 ntTSL 3 BASIC36.36■■■■□ 3.41
SPON1Q9HCB6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC36.35■■■■□ 3.41
SPON1Q9HCB6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC36.35■■■■□ 3.41
SPON1Q9HCB6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC36.33■■■■□ 3.41
SPON1Q9HCB6 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC36.33■■■■□ 3.41
SPON1Q9HCB6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC36.31■■■■□ 3.4
SPON1Q9HCB6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC36.31■■■■□ 3.4
SPON1Q9HCB6 AL133380.1-201ENST00000506013 324 ntBASIC36.31■■■■□ 3.4
SPON1Q9HCB6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
SPON1Q9HCB6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
SPON1Q9HCB6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC36.26■■■■□ 3.39
SPON1Q9HCB6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC36.25■■■■□ 3.39
SPON1Q9HCB6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC36.22■■■■□ 3.39
SPON1Q9HCB6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
SPON1Q9HCB6 MIR4449-201ENST00000578365 66 ntBASIC36.21■■■■□ 3.39
SPON1Q9HCB6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
SPON1Q9HCB6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC36.19■■■■□ 3.38
SPON1Q9HCB6 CHML-205ENST00000638160 705 ntTSL 3 BASIC36.19■■■■□ 3.38
SPON1Q9HCB6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
SPON1Q9HCB6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC36.17■■■■□ 3.38
SPON1Q9HCB6 MVK-208ENST00000539696 608 ntTSL 5 BASIC36.13■■■■□ 3.37
SPON1Q9HCB6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC36.11■■■■□ 3.37
SPON1Q9HCB6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC36.11■■■■□ 3.37
SPON1Q9HCB6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
SPON1Q9HCB6 AC005559.1-201ENST00000589661 871 ntBASIC36.1■■■■□ 3.37
SPON1Q9HCB6 MIR762-201ENST00000390236 83 ntBASIC36.09■■■■□ 3.37
SPON1Q9HCB6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC36.08■■■■□ 3.37
SPON1Q9HCB6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC36.08■■■■□ 3.37
SPON1Q9HCB6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC36.07■■■■□ 3.36
SPON1Q9HCB6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC36.05■■■■□ 3.36
SPON1Q9HCB6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC36.05■■■■□ 3.36
SPON1Q9HCB6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC36.01■■■■□ 3.36
SPON1Q9HCB6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC35.98■■■■□ 3.35
SPON1Q9HCB6 HSD17B1P1-201ENST00000590052 955 ntBASIC35.97■■■■□ 3.35
SPON1Q9HCB6 MIR639-201ENST00000384974 98 ntBASIC35.96■■■■□ 3.35
SPON1Q9HCB6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
SPON1Q9HCB6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
SPON1Q9HCB6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC35.94■■■■□ 3.34
SPON1Q9HCB6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
SPON1Q9HCB6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
SPON1Q9HCB6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC35.91■■■■□ 3.34
SPON1Q9HCB6 AC145285.7-201ENST00000614819 1539 ntBASIC35.91■■■■□ 3.34
SPON1Q9HCB6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
SPON1Q9HCB6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
SPON1Q9HCB6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC35.9■■■■□ 3.34
SPON1Q9HCB6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC35.89■■■■□ 3.34
SPON1Q9HCB6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC35.89■■■■□ 3.34
SPON1Q9HCB6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC35.87■■■■□ 3.33
SPON1Q9HCB6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC35.84■■■■□ 3.33
SPON1Q9HCB6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC35.83■■■■□ 3.33
SPON1Q9HCB6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
SPON1Q9HCB6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
SPON1Q9HCB6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC35.82■■■■□ 3.32
SPON1Q9HCB6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC35.8■■■■□ 3.32
SPON1Q9HCB6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC35.79■■■■□ 3.32
SPON1Q9HCB6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC35.79■■■■□ 3.32
SPON1Q9HCB6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.31
SPON1Q9HCB6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.31
SPON1Q9HCB6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC35.75■■■■□ 3.31
SPON1Q9HCB6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC35.74■■■■□ 3.31
SPON1Q9HCB6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC35.74■■■■□ 3.31
SPON1Q9HCB6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC35.73■■■■□ 3.31
SPON1Q9HCB6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC35.73■■■■□ 3.31
SPON1Q9HCB6 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
SPON1Q9HCB6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC35.7■■■■□ 3.31
SPON1Q9HCB6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC35.69■■■■□ 3.3
SPON1Q9HCB6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC35.67■■■■□ 3.3
SPON1Q9HCB6 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC35.66■■■■□ 3.3
SPON1Q9HCB6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC35.65■■■■□ 3.3
SPON1Q9HCB6 DUX4L29-201ENST00000425409 679 ntBASIC35.64■■■■□ 3.3
SPON1Q9HCB6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC35.63■■■■□ 3.29
SPON1Q9HCB6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC35.62■■■■□ 3.29
SPON1Q9HCB6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC35.62■■■■□ 3.29
SPON1Q9HCB6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC35.59■■■■□ 3.29
SPON1Q9HCB6 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
SPON1Q9HCB6 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC35.58■■■■□ 3.29
SPON1Q9HCB6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC35.57■■■■□ 3.28
SPON1Q9HCB6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC35.56■■■■□ 3.28
SPON1Q9HCB6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms