Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
ATXN3LQ9H3M9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
ATXN3LQ9H3M9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
ATXN3LQ9H3M9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC29.35■■■□□ 2.29
ATXN3LQ9H3M9 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
ATXN3LQ9H3M9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC29.34■■■□□ 2.29
ATXN3LQ9H3M9 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
ATXN3LQ9H3M9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ATXN3LQ9H3M9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
ATXN3LQ9H3M9 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
ATXN3LQ9H3M9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
ATXN3LQ9H3M9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC29.32■■■□□ 2.28
ATXN3LQ9H3M9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.3■■■□□ 2.28
ATXN3LQ9H3M9 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.3■■■□□ 2.28
ATXN3LQ9H3M9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ATXN3LQ9H3M9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.29■■■□□ 2.28
ATXN3LQ9H3M9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
ATXN3LQ9H3M9 CAHM-201ENST00000604200 896 ntBASIC29.27■■■□□ 2.28
ATXN3LQ9H3M9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.27■■■□□ 2.28
ATXN3LQ9H3M9 AL133380.1-201ENST00000506013 324 ntBASIC29.25■■■□□ 2.27
ATXN3LQ9H3M9 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
ATXN3LQ9H3M9 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.25■■■□□ 2.27
ATXN3LQ9H3M9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
ATXN3LQ9H3M9 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
ATXN3LQ9H3M9 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
ATXN3LQ9H3M9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC29.19■■■□□ 2.26
ATXN3LQ9H3M9 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
ATXN3LQ9H3M9 RPS2P35-201ENST00000443417 897 ntBASIC29.17■■■□□ 2.26
ATXN3LQ9H3M9 AL391121.1-201ENST00000607967 1349 ntBASIC29.17■■■□□ 2.26
ATXN3LQ9H3M9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
ATXN3LQ9H3M9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
ATXN3LQ9H3M9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
ATXN3LQ9H3M9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.1■■■□□ 2.25
ATXN3LQ9H3M9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
ATXN3LQ9H3M9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC29.09■■■□□ 2.25
ATXN3LQ9H3M9 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.08■■■□□ 2.25
ATXN3LQ9H3M9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.08■■■□□ 2.25
ATXN3LQ9H3M9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.08■■■□□ 2.25
ATXN3LQ9H3M9 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
ATXN3LQ9H3M9 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
ATXN3LQ9H3M9 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
ATXN3LQ9H3M9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.02■■■□□ 2.24
ATXN3LQ9H3M9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
ATXN3LQ9H3M9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
ATXN3LQ9H3M9 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.23
ATXN3LQ9H3M9 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
ATXN3LQ9H3M9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29■■■□□ 2.23
ATXN3LQ9H3M9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC29■■■□□ 2.23
ATXN3LQ9H3M9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
ATXN3LQ9H3M9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
ATXN3LQ9H3M9 AL162393.1-201ENST00000437852 946 ntBASIC28.94■■■□□ 2.22
ATXN3LQ9H3M9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.94■■■□□ 2.22
ATXN3LQ9H3M9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC28.94■■■□□ 2.22
ATXN3LQ9H3M9 AP006261.1-201ENST00000584783 668 ntBASIC28.94■■■□□ 2.22
ATXN3LQ9H3M9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC28.91■■■□□ 2.22
ATXN3LQ9H3M9 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.91■■■□□ 2.22
ATXN3LQ9H3M9 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC28.9■■■□□ 2.22
ATXN3LQ9H3M9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC28.89■■■□□ 2.22
ATXN3LQ9H3M9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
ATXN3LQ9H3M9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
ATXN3LQ9H3M9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC28.86■■■□□ 2.21
ATXN3LQ9H3M9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
ATXN3LQ9H3M9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
ATXN3LQ9H3M9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.86■■■□□ 2.21
ATXN3LQ9H3M9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC28.85■■■□□ 2.21
ATXN3LQ9H3M9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
ATXN3LQ9H3M9 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
ATXN3LQ9H3M9 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
ATXN3LQ9H3M9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
ATXN3LQ9H3M9 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
ATXN3LQ9H3M9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
ATXN3LQ9H3M9 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
ATXN3LQ9H3M9 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
ATXN3LQ9H3M9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
ATXN3LQ9H3M9 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
ATXN3LQ9H3M9 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
ATXN3LQ9H3M9 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
ATXN3LQ9H3M9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.77■■■□□ 2.2
ATXN3LQ9H3M9 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
ATXN3LQ9H3M9 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
ATXN3LQ9H3M9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
ATXN3LQ9H3M9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
ATXN3LQ9H3M9 MIR3665-201ENST00000578708 105 ntBASIC28.76■■■□□ 2.19
ATXN3LQ9H3M9 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
ATXN3LQ9H3M9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC28.75■■■□□ 2.19
ATXN3LQ9H3M9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC28.75■■■□□ 2.19
ATXN3LQ9H3M9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
ATXN3LQ9H3M9 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC28.72■■■□□ 2.19
ATXN3LQ9H3M9 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
ATXN3LQ9H3M9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
ATXN3LQ9H3M9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
ATXN3LQ9H3M9 MIR762-201ENST00000390236 83 ntBASIC28.71■■■□□ 2.19
ATXN3LQ9H3M9 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.71■■■□□ 2.19
ATXN3LQ9H3M9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
ATXN3LQ9H3M9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
ATXN3LQ9H3M9 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
ATXN3LQ9H3M9 DUX4L28-201ENST00000623687 678 ntBASIC28.66■■■□□ 2.18
ATXN3LQ9H3M9 WASH5P-204ENST00000632292 975 ntBASIC28.66■■■□□ 2.18
ATXN3LQ9H3M9 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
ATXN3LQ9H3M9 AC005559.1-201ENST00000589661 871 ntBASIC28.63■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms