Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
SNX25Q9H3E2 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
SNX25Q9H3E2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
SNX25Q9H3E2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
SNX25Q9H3E2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
SNX25Q9H3E2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.65■■■□□ 2.34
SNX25Q9H3E2 SETD8P1-201ENST00000623146 1180 ntBASIC29.65■■■□□ 2.34
SNX25Q9H3E2 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
SNX25Q9H3E2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
SNX25Q9H3E2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.63■■■□□ 2.33
SNX25Q9H3E2 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
SNX25Q9H3E2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.63■■■□□ 2.33
SNX25Q9H3E2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SNX25Q9H3E2 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
SNX25Q9H3E2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
SNX25Q9H3E2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
SNX25Q9H3E2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SNX25Q9H3E2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.57■■■□□ 2.32
SNX25Q9H3E2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.56■■■□□ 2.32
SNX25Q9H3E2 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SNX25Q9H3E2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.54■■■□□ 2.32
SNX25Q9H3E2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
SNX25Q9H3E2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
SNX25Q9H3E2 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC29.52■■■□□ 2.32
SNX25Q9H3E2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.52■■■□□ 2.32
SNX25Q9H3E2 AC097358.2-201ENST00000607541 1159 ntBASIC29.52■■■□□ 2.32
SNX25Q9H3E2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
SNX25Q9H3E2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.51■■■□□ 2.31
SNX25Q9H3E2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
SNX25Q9H3E2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC29.5■■■□□ 2.31
SNX25Q9H3E2 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC29.48■■■□□ 2.31
SNX25Q9H3E2 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
SNX25Q9H3E2 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
SNX25Q9H3E2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
SNX25Q9H3E2 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SNX25Q9H3E2 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC29.45■■■□□ 2.31
SNX25Q9H3E2 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
SNX25Q9H3E2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
SNX25Q9H3E2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SNX25Q9H3E2 AL133380.1-201ENST00000506013 324 ntBASIC29.44■■■□□ 2.3
SNX25Q9H3E2 AC136428.2-201ENST00000563187 214 ntBASIC29.44■■■□□ 2.3
SNX25Q9H3E2 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SNX25Q9H3E2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.42■■■□□ 2.3
SNX25Q9H3E2 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
SNX25Q9H3E2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC29.4■■■□□ 2.3
SNX25Q9H3E2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.39■■■□□ 2.3
SNX25Q9H3E2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
SNX25Q9H3E2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.39■■■□□ 2.3
SNX25Q9H3E2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC29.37■■■□□ 2.29
SNX25Q9H3E2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
SNX25Q9H3E2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.36■■■□□ 2.29
SNX25Q9H3E2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.36■■■□□ 2.29
SNX25Q9H3E2 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SNX25Q9H3E2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
SNX25Q9H3E2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.35■■■□□ 2.29
SNX25Q9H3E2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
SNX25Q9H3E2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SNX25Q9H3E2 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC29.33■■■□□ 2.29
SNX25Q9H3E2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.32■■■□□ 2.28
SNX25Q9H3E2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SNX25Q9H3E2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SNX25Q9H3E2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SNX25Q9H3E2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
SNX25Q9H3E2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SNX25Q9H3E2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.29■■■□□ 2.28
SNX25Q9H3E2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SNX25Q9H3E2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC29.28■■■□□ 2.28
SNX25Q9H3E2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SNX25Q9H3E2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
SNX25Q9H3E2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC29.25■■■□□ 2.27
SNX25Q9H3E2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
SNX25Q9H3E2 CAHM-201ENST00000604200 896 ntBASIC29.21■■■□□ 2.27
SNX25Q9H3E2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.21■■■□□ 2.27
SNX25Q9H3E2 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
SNX25Q9H3E2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
SNX25Q9H3E2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
SNX25Q9H3E2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
SNX25Q9H3E2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC29.18■■■□□ 2.26
SNX25Q9H3E2 AL391121.1-201ENST00000607967 1349 ntBASIC29.18■■■□□ 2.26
SNX25Q9H3E2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC29.17■■■□□ 2.26
SNX25Q9H3E2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SNX25Q9H3E2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SNX25Q9H3E2 SUZ12P1-203ENST00000578195 985 ntBASIC29.15■■■□□ 2.26
SNX25Q9H3E2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
SNX25Q9H3E2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
SNX25Q9H3E2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
SNX25Q9H3E2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC29.12■■■□□ 2.25
SNX25Q9H3E2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.12■■■□□ 2.25
SNX25Q9H3E2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
SNX25Q9H3E2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SNX25Q9H3E2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC29.1■■■□□ 2.25
SNX25Q9H3E2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SNX25Q9H3E2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SNX25Q9H3E2 WASH5P-204ENST00000632292 975 ntBASIC29.09■■■□□ 2.25
SNX25Q9H3E2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SNX25Q9H3E2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.08■■■□□ 2.25
SNX25Q9H3E2 AC120057.4-201ENST00000624722 1615 ntBASIC29.08■■■□□ 2.25
SNX25Q9H3E2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC29.08■■■□□ 2.25
SNX25Q9H3E2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SNX25Q9H3E2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.04■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms