Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.12■■■□□ 2.41
NUCKS1Q9H1E3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
NUCKS1Q9H1E3 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.1■■■□□ 2.41
NUCKS1Q9H1E3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
NUCKS1Q9H1E3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.07■■■□□ 2.4
NUCKS1Q9H1E3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.07■■■□□ 2.4
NUCKS1Q9H1E3 AP002365.1-201ENST00000603448 772 ntBASIC30.07■■■□□ 2.4
NUCKS1Q9H1E3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
NUCKS1Q9H1E3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
NUCKS1Q9H1E3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
NUCKS1Q9H1E3 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.01■■■□□ 2.4
NUCKS1Q9H1E3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.39
NUCKS1Q9H1E3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30■■■□□ 2.39
NUCKS1Q9H1E3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC29.99■■■□□ 2.39
NUCKS1Q9H1E3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
NUCKS1Q9H1E3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.98■■■□□ 2.39
NUCKS1Q9H1E3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
NUCKS1Q9H1E3 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
NUCKS1Q9H1E3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
NUCKS1Q9H1E3 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
NUCKS1Q9H1E3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
NUCKS1Q9H1E3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.96■■■□□ 2.39
NUCKS1Q9H1E3 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC29.96■■■□□ 2.39
NUCKS1Q9H1E3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
NUCKS1Q9H1E3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.94■■■□□ 2.38
NUCKS1Q9H1E3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
NUCKS1Q9H1E3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
NUCKS1Q9H1E3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC29.94■■■□□ 2.38
NUCKS1Q9H1E3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
NUCKS1Q9H1E3 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
NUCKS1Q9H1E3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.92■■■□□ 2.38
NUCKS1Q9H1E3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
NUCKS1Q9H1E3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
NUCKS1Q9H1E3 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.38
NUCKS1Q9H1E3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.89■■■□□ 2.38
NUCKS1Q9H1E3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.38
NUCKS1Q9H1E3 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
NUCKS1Q9H1E3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.88■■■□□ 2.37
NUCKS1Q9H1E3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC29.88■■■□□ 2.37
NUCKS1Q9H1E3 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
NUCKS1Q9H1E3 MVK-208ENST00000539696 608 ntTSL 5 BASIC29.87■■■□□ 2.37
NUCKS1Q9H1E3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
NUCKS1Q9H1E3 DYNLL1-208ENST00000550178 581 ntBASIC29.87■■■□□ 2.37
NUCKS1Q9H1E3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
NUCKS1Q9H1E3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
NUCKS1Q9H1E3 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.85■■■□□ 2.37
NUCKS1Q9H1E3 AC120057.4-201ENST00000624722 1615 ntBASIC29.84■■■□□ 2.37
NUCKS1Q9H1E3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
NUCKS1Q9H1E3 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.83■■■□□ 2.37
NUCKS1Q9H1E3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC29.83■■■□□ 2.37
NUCKS1Q9H1E3 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
NUCKS1Q9H1E3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
NUCKS1Q9H1E3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.81■■■□□ 2.36
NUCKS1Q9H1E3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
NUCKS1Q9H1E3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
NUCKS1Q9H1E3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.79■■■□□ 2.36
NUCKS1Q9H1E3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC29.78■■■□□ 2.36
NUCKS1Q9H1E3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
NUCKS1Q9H1E3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.76■■■□□ 2.36
NUCKS1Q9H1E3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
NUCKS1Q9H1E3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
NUCKS1Q9H1E3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.74■■■□□ 2.35
NUCKS1Q9H1E3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
NUCKS1Q9H1E3 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
NUCKS1Q9H1E3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
NUCKS1Q9H1E3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
NUCKS1Q9H1E3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC29.72■■■□□ 2.35
NUCKS1Q9H1E3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC29.71■■■□□ 2.35
NUCKS1Q9H1E3 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC29.71■■■□□ 2.35
NUCKS1Q9H1E3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
NUCKS1Q9H1E3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
NUCKS1Q9H1E3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
NUCKS1Q9H1E3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC29.66■■■□□ 2.34
NUCKS1Q9H1E3 AL031258.1-201ENST00000623562 325 ntBASIC29.65■■■□□ 2.34
NUCKS1Q9H1E3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC29.65■■■□□ 2.34
NUCKS1Q9H1E3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
NUCKS1Q9H1E3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
NUCKS1Q9H1E3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.61■■■□□ 2.33
NUCKS1Q9H1E3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
NUCKS1Q9H1E3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
NUCKS1Q9H1E3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
NUCKS1Q9H1E3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.57■■■□□ 2.32
NUCKS1Q9H1E3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.57■■■□□ 2.32
NUCKS1Q9H1E3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
NUCKS1Q9H1E3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
NUCKS1Q9H1E3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
NUCKS1Q9H1E3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
NUCKS1Q9H1E3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
NUCKS1Q9H1E3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
NUCKS1Q9H1E3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
NUCKS1Q9H1E3 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
NUCKS1Q9H1E3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
NUCKS1Q9H1E3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.49■■■□□ 2.31
NUCKS1Q9H1E3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC29.49■■■□□ 2.31
NUCKS1Q9H1E3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.48■■■□□ 2.31
NUCKS1Q9H1E3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
NUCKS1Q9H1E3 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
NUCKS1Q9H1E3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
NUCKS1Q9H1E3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.45■■■□□ 2.31
NUCKS1Q9H1E3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.45■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 7.7 ms