Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AL133380.1-201ENST00000506013 324 ntBASIC34.75■■■■□ 3.15
RTFDC1Q9BY42 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
RTFDC1Q9BY42 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC34.71■■■■□ 3.15
RTFDC1Q9BY42 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
RTFDC1Q9BY42 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC34.69■■■■□ 3.14
RTFDC1Q9BY42 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC34.64■■■■□ 3.14
RTFDC1Q9BY42 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
RTFDC1Q9BY42 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC34.63■■■■□ 3.13
RTFDC1Q9BY42 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
RTFDC1Q9BY42 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
RTFDC1Q9BY42 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
RTFDC1Q9BY42 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC34.59■■■■□ 3.13
RTFDC1Q9BY42 HNRNPLP2-201ENST00000568980 1570 ntBASIC34.57■■■■□ 3.13
RTFDC1Q9BY42 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
RTFDC1Q9BY42 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
RTFDC1Q9BY42 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
RTFDC1Q9BY42 EBPL-202ENST00000378268 680 ntTSL 3 BASIC34.48■■■■□ 3.11
RTFDC1Q9BY42 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC34.47■■■■□ 3.11
RTFDC1Q9BY42 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC34.47■■■■□ 3.11
RTFDC1Q9BY42 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC34.44■■■■□ 3.1
RTFDC1Q9BY42 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC34.44■■■■□ 3.1
RTFDC1Q9BY42 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC34.44■■■■□ 3.1
RTFDC1Q9BY42 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC34.43■■■■□ 3.1
RTFDC1Q9BY42 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC34.42■■■■□ 3.1
RTFDC1Q9BY42 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC34.42■■■■□ 3.1
RTFDC1Q9BY42 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC34.42■■■■□ 3.1
RTFDC1Q9BY42 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC34.41■■■■□ 3.1
RTFDC1Q9BY42 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC34.41■■■■□ 3.1
RTFDC1Q9BY42 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC34.4■■■■□ 3.1
RTFDC1Q9BY42 MIR3665-201ENST00000578708 105 ntBASIC34.4■■■■□ 3.1
RTFDC1Q9BY42 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
RTFDC1Q9BY42 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
RTFDC1Q9BY42 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
RTFDC1Q9BY42 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC34.35■■■■□ 3.09
RTFDC1Q9BY42 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC34.34■■■■□ 3.09
RTFDC1Q9BY42 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
RTFDC1Q9BY42 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
RTFDC1Q9BY42 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC34.3■■■■□ 3.08
RTFDC1Q9BY42 AC087741.3-201ENST00000624270 1347 ntBASIC34.3■■■■□ 3.08
RTFDC1Q9BY42 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC34.28■■■■□ 3.08
RTFDC1Q9BY42 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
RTFDC1Q9BY42 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
RTFDC1Q9BY42 DUX4L28-201ENST00000623687 678 ntBASIC34.27■■■■□ 3.08
RTFDC1Q9BY42 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
RTFDC1Q9BY42 ABHD17AP4-201ENST00000411545 909 ntBASIC34.26■■■■□ 3.08
RTFDC1Q9BY42 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
RTFDC1Q9BY42 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
RTFDC1Q9BY42 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC34.23■■■■□ 3.07
RTFDC1Q9BY42 CHML-205ENST00000638160 705 ntTSL 3 BASIC34.23■■■■□ 3.07
RTFDC1Q9BY42 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
RTFDC1Q9BY42 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
RTFDC1Q9BY42 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
RTFDC1Q9BY42 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
RTFDC1Q9BY42 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC34.2■■■■□ 3.07
RTFDC1Q9BY42 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
RTFDC1Q9BY42 MIR762-201ENST00000390236 83 ntBASIC34.19■■■■□ 3.06
RTFDC1Q9BY42 MIR7108-201ENST00000614319 87 ntBASIC34.18■■■■□ 3.06
RTFDC1Q9BY42 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC34.18■■■■□ 3.06
RTFDC1Q9BY42 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC34.18■■■■□ 3.06
RTFDC1Q9BY42 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC34.18■■■■□ 3.06
RTFDC1Q9BY42 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC34.18■■■■□ 3.06
RTFDC1Q9BY42 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC34.16■■■■□ 3.06
RTFDC1Q9BY42 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
RTFDC1Q9BY42 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
RTFDC1Q9BY42 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
RTFDC1Q9BY42 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
RTFDC1Q9BY42 MLEC-202ENST00000412616 841 ntTSL 3 BASIC34.14■■■■□ 3.06
RTFDC1Q9BY42 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
RTFDC1Q9BY42 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC34.12■■■■□ 3.05
RTFDC1Q9BY42 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
RTFDC1Q9BY42 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC34.09■■■■□ 3.05
RTFDC1Q9BY42 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC34.09■■■■□ 3.05
RTFDC1Q9BY42 AC005559.1-201ENST00000589661 871 ntBASIC34.08■■■■□ 3.05
RTFDC1Q9BY42 AC044849.2-201ENST00000606596 710 ntBASIC34.08■■■■□ 3.05
RTFDC1Q9BY42 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
RTFDC1Q9BY42 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC34.05■■■■□ 3.04
RTFDC1Q9BY42 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC34.01■■■■□ 3.03
RTFDC1Q9BY42 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC34■■■■□ 3.03
RTFDC1Q9BY42 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC34■■■■□ 3.03
RTFDC1Q9BY42 DENR-202ENST00000455982 1052 ntTSL 5 BASIC34■■■■□ 3.03
RTFDC1Q9BY42 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC34■■■■□ 3.03
RTFDC1Q9BY42 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
RTFDC1Q9BY42 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC33.99■■■■□ 3.03
RTFDC1Q9BY42 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC33.98■■■■□ 3.03
RTFDC1Q9BY42 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC33.97■■■■□ 3.03
RTFDC1Q9BY42 PVT1-219ENST00000523427 938 ntTSL 3 BASIC33.97■■■■□ 3.03
RTFDC1Q9BY42 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC33.95■■■■□ 3.03
RTFDC1Q9BY42 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC33.94■■■■□ 3.02
RTFDC1Q9BY42 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC33.93■■■■□ 3.02
RTFDC1Q9BY42 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC33.93■■■■□ 3.02
RTFDC1Q9BY42 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC33.92■■■■□ 3.02
RTFDC1Q9BY42 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC33.92■■■■□ 3.02
RTFDC1Q9BY42 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC33.92■■■■□ 3.02
RTFDC1Q9BY42 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
RTFDC1Q9BY42 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC33.89■■■■□ 3.02
RTFDC1Q9BY42 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
RTFDC1Q9BY42 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC33.87■■■■□ 3.01
RTFDC1Q9BY42 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC33.84■■■■□ 3.01
RTFDC1Q9BY42 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC33.84■■■■□ 3.01
RTFDC1Q9BY42 MBP-237ENST00000579129 1052 ntTSL 5 BASIC33.83■■■■□ 3.01
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms