Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
PCDH15Q96QU1 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PCDH15Q96QU1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
PCDH15Q96QU1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
PCDH15Q96QU1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
PCDH15Q96QU1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.81■■■□□ 2.04
PCDH15Q96QU1 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27.8■■■□□ 2.04
PCDH15Q96QU1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.79■■■□□ 2.04
PCDH15Q96QU1 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PCDH15Q96QU1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.75■■■□□ 2.03
PCDH15Q96QU1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
PCDH15Q96QU1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.74■■■□□ 2.03
PCDH15Q96QU1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.71■■■□□ 2.03
PCDH15Q96QU1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
PCDH15Q96QU1 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
PCDH15Q96QU1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
PCDH15Q96QU1 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
PCDH15Q96QU1 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
PCDH15Q96QU1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC27.67■■■□□ 2.02
PCDH15Q96QU1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
PCDH15Q96QU1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
PCDH15Q96QU1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.63■■■□□ 2.01
PCDH15Q96QU1 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PCDH15Q96QU1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.62■■■□□ 2.01
PCDH15Q96QU1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.61■■■□□ 2.01
PCDH15Q96QU1 DUX4L28-201ENST00000623687 678 ntBASIC27.6■■■□□ 2.01
PCDH15Q96QU1 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PCDH15Q96QU1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.58■■■□□ 2.01
PCDH15Q96QU1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.58■■■□□ 2.01
PCDH15Q96QU1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.58■■■□□ 2.01
PCDH15Q96QU1 MIR3665-201ENST00000578708 105 ntBASIC27.58■■■□□ 2.01
PCDH15Q96QU1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.56■■■□□ 2
PCDH15Q96QU1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.56■■■□□ 2
PCDH15Q96QU1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
PCDH15Q96QU1 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
PCDH15Q96QU1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.55■■■□□ 2
PCDH15Q96QU1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.54■■■□□ 2
PCDH15Q96QU1 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.53■■■□□ 2
PCDH15Q96QU1 AC087741.3-201ENST00000624270 1347 ntBASIC27.53■■■□□ 2
PCDH15Q96QU1 MIR7108-201ENST00000614319 87 ntBASIC27.53■■■□□ 2
PCDH15Q96QU1 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.52■■■□□ 2
PCDH15Q96QU1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.51■■□□□ 1.99
PCDH15Q96QU1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.51■■□□□ 1.99
PCDH15Q96QU1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.49■■□□□ 1.99
PCDH15Q96QU1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PCDH15Q96QU1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PCDH15Q96QU1 ABHD17AP4-201ENST00000411545 909 ntBASIC27.48■■□□□ 1.99
PCDH15Q96QU1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.48■■□□□ 1.99
PCDH15Q96QU1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
PCDH15Q96QU1 AC044849.2-201ENST00000606596 710 ntBASIC27.47■■□□□ 1.99
PCDH15Q96QU1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PCDH15Q96QU1 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
PCDH15Q96QU1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
PCDH15Q96QU1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.43■■□□□ 1.98
PCDH15Q96QU1 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
PCDH15Q96QU1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.41■■□□□ 1.98
PCDH15Q96QU1 AC005559.1-201ENST00000589661 871 ntBASIC27.39■■□□□ 1.98
PCDH15Q96QU1 MIR762-201ENST00000390236 83 ntBASIC27.39■■□□□ 1.97
PCDH15Q96QU1 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.38■■□□□ 1.97
PCDH15Q96QU1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
PCDH15Q96QU1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCDH15Q96QU1 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.37■■□□□ 1.97
PCDH15Q96QU1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.37■■□□□ 1.97
PCDH15Q96QU1 HLA-V-202ENST00000446817 847 ntBASIC27.37■■□□□ 1.97
PCDH15Q96QU1 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
PCDH15Q96QU1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.33■■□□□ 1.97
PCDH15Q96QU1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.33■■□□□ 1.97
PCDH15Q96QU1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
PCDH15Q96QU1 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDH15Q96QU1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
PCDH15Q96QU1 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDH15Q96QU1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.29■■□□□ 1.96
PCDH15Q96QU1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.29■■□□□ 1.96
PCDH15Q96QU1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.29■■□□□ 1.96
PCDH15Q96QU1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDH15Q96QU1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PCDH15Q96QU1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.27■■□□□ 1.96
PCDH15Q96QU1 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDH15Q96QU1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
PCDH15Q96QU1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.26■■□□□ 1.95
PCDH15Q96QU1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDH15Q96QU1 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDH15Q96QU1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.24■■□□□ 1.95
PCDH15Q96QU1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDH15Q96QU1 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDH15Q96QU1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PCDH15Q96QU1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.21■■□□□ 1.95
PCDH15Q96QU1 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
PCDH15Q96QU1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC27.2■■□□□ 1.94
PCDH15Q96QU1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
PCDH15Q96QU1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.18■■□□□ 1.94
PCDH15Q96QU1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.18■■□□□ 1.94
PCDH15Q96QU1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDH15Q96QU1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC27.18■■□□□ 1.94
PCDH15Q96QU1 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDH15Q96QU1 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDH15Q96QU1 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDH15Q96QU1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.17■■□□□ 1.94
PCDH15Q96QU1 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDH15Q96QU1 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms