Protein–RNA interactions for Protein: Q96P71

NECAB3, N-terminal EF-hand calcium-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3Q96P71 MIR3665-201ENST00000578708 105 ntBASIC29.91■■■□□ 2.38
NECAB3Q96P71 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC29.91■■■□□ 2.38
NECAB3Q96P71 AC087741.3-201ENST00000624270 1347 ntBASIC29.9■■■□□ 2.38
NECAB3Q96P71 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC29.89■■■□□ 2.38
NECAB3Q96P71 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.87■■■□□ 2.37
NECAB3Q96P71 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.86■■■□□ 2.37
NECAB3Q96P71 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.84■■■□□ 2.37
NECAB3Q96P71 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
NECAB3Q96P71 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
NECAB3Q96P71 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.83■■■□□ 2.37
NECAB3Q96P71 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.82■■■□□ 2.36
NECAB3Q96P71 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.82■■■□□ 2.36
NECAB3Q96P71 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
NECAB3Q96P71 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.79■■■□□ 2.36
NECAB3Q96P71 DUX4L28-201ENST00000623687 678 ntBASIC29.78■■■□□ 2.36
NECAB3Q96P71 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
NECAB3Q96P71 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
NECAB3Q96P71 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
NECAB3Q96P71 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.74■■■□□ 2.35
NECAB3Q96P71 ZNRF2P2-203ENST00000454624 420 ntBASIC29.71■■■□□ 2.35
NECAB3Q96P71 AC044849.2-201ENST00000606596 710 ntBASIC29.71■■■□□ 2.35
NECAB3Q96P71 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC29.7■■■□□ 2.35
NECAB3Q96P71 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
NECAB3Q96P71 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC29.69■■■□□ 2.34
NECAB3Q96P71 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.68■■■□□ 2.34
NECAB3Q96P71 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.68■■■□□ 2.34
NECAB3Q96P71 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
NECAB3Q96P71 AL133380.1-201ENST00000506013 324 ntBASIC29.66■■■□□ 2.34
NECAB3Q96P71 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.65■■■□□ 2.34
NECAB3Q96P71 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.64■■■□□ 2.34
NECAB3Q96P71 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
NECAB3Q96P71 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.64■■■□□ 2.34
NECAB3Q96P71 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.64■■■□□ 2.34
NECAB3Q96P71 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
NECAB3Q96P71 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.6■■■□□ 2.33
NECAB3Q96P71 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
NECAB3Q96P71 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
NECAB3Q96P71 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
NECAB3Q96P71 MIR4449-201ENST00000578365 66 ntBASIC29.51■■■□□ 2.31
NECAB3Q96P71 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
NECAB3Q96P71 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.5■■■□□ 2.31
NECAB3Q96P71 MIR762-201ENST00000390236 83 ntBASIC29.48■■■□□ 2.31
NECAB3Q96P71 AC145285.7-201ENST00000614819 1539 ntBASIC29.47■■■□□ 2.31
NECAB3Q96P71 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.47■■■□□ 2.31
NECAB3Q96P71 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
NECAB3Q96P71 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC29.46■■■□□ 2.31
NECAB3Q96P71 AC005559.1-201ENST00000589661 871 ntBASIC29.46■■■□□ 2.31
NECAB3Q96P71 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
NECAB3Q96P71 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
NECAB3Q96P71 MVK-208ENST00000539696 608 ntTSL 5 BASIC29.45■■■□□ 2.31
NECAB3Q96P71 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
NECAB3Q96P71 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
NECAB3Q96P71 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
NECAB3Q96P71 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
NECAB3Q96P71 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.42■■■□□ 2.3
NECAB3Q96P71 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
NECAB3Q96P71 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.4■■■□□ 2.3
NECAB3Q96P71 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.39■■■□□ 2.3
NECAB3Q96P71 HSD17B1P1-201ENST00000590052 955 ntBASIC29.39■■■□□ 2.3
NECAB3Q96P71 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
NECAB3Q96P71 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
NECAB3Q96P71 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
NECAB3Q96P71 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
NECAB3Q96P71 BRD4-212ENST00000630599 726 ntTSL 2 BASIC29.34■■■□□ 2.29
NECAB3Q96P71 MIR639-201ENST00000384974 98 ntBASIC29.31■■■□□ 2.28
NECAB3Q96P71 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
NECAB3Q96P71 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
NECAB3Q96P71 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
NECAB3Q96P71 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.28■■■□□ 2.28
NECAB3Q96P71 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.28■■■□□ 2.28
NECAB3Q96P71 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
NECAB3Q96P71 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
NECAB3Q96P71 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.25■■■□□ 2.27
NECAB3Q96P71 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
NECAB3Q96P71 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.25■■■□□ 2.27
NECAB3Q96P71 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.24■■■□□ 2.27
NECAB3Q96P71 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC29.24■■■□□ 2.27
NECAB3Q96P71 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.24■■■□□ 2.27
NECAB3Q96P71 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.24■■■□□ 2.27
NECAB3Q96P71 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
NECAB3Q96P71 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
NECAB3Q96P71 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
NECAB3Q96P71 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.2■■■□□ 2.27
NECAB3Q96P71 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.2■■■□□ 2.27
NECAB3Q96P71 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.2■■■□□ 2.26
NECAB3Q96P71 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC29.19■■■□□ 2.26
NECAB3Q96P71 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
NECAB3Q96P71 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC29.14■■■□□ 2.26
NECAB3Q96P71 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
NECAB3Q96P71 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.13■■■□□ 2.25
NECAB3Q96P71 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC29.12■■■□□ 2.25
NECAB3Q96P71 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
NECAB3Q96P71 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
NECAB3Q96P71 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.11■■■□□ 2.25
NECAB3Q96P71 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.09■■■□□ 2.25
NECAB3Q96P71 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.25
NECAB3Q96P71 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
NECAB3Q96P71 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
NECAB3Q96P71 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.07■■■□□ 2.24
NECAB3Q96P71 DUX4L29-201ENST00000425409 679 ntBASIC29.06■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms