Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AL391121.1-201ENST00000607967 1349 ntBASIC27.49■■□□□ 1.99
CNTNAP3BQ96NU0 AC087741.3-201ENST00000624270 1347 ntBASIC27.49■■□□□ 1.99
CNTNAP3BQ96NU0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.49■■□□□ 1.99
CNTNAP3BQ96NU0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CNTNAP3BQ96NU0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
CNTNAP3BQ96NU0 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CNTNAP3BQ96NU0 ZNRF2P2-203ENST00000454624 420 ntBASIC27.44■■□□□ 1.98
CNTNAP3BQ96NU0 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CNTNAP3BQ96NU0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.4■■□□□ 1.98
CNTNAP3BQ96NU0 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CNTNAP3BQ96NU0 MIR4449-201ENST00000578365 66 ntBASIC27.39■■□□□ 1.98
CNTNAP3BQ96NU0 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CNTNAP3BQ96NU0 AC044849.2-201ENST00000606596 710 ntBASIC27.38■■□□□ 1.97
CNTNAP3BQ96NU0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
CNTNAP3BQ96NU0 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CNTNAP3BQ96NU0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
CNTNAP3BQ96NU0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
CNTNAP3BQ96NU0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.34■■□□□ 1.97
CNTNAP3BQ96NU0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.34■■□□□ 1.97
CNTNAP3BQ96NU0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CNTNAP3BQ96NU0 HSD17B1P1-201ENST00000590052 955 ntBASIC27.3■■□□□ 1.96
CNTNAP3BQ96NU0 DUX4L28-201ENST00000623687 678 ntBASIC27.3■■□□□ 1.96
CNTNAP3BQ96NU0 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CNTNAP3BQ96NU0 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC27.3■■□□□ 1.96
CNTNAP3BQ96NU0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.29■■□□□ 1.96
CNTNAP3BQ96NU0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CNTNAP3BQ96NU0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.28■■□□□ 1.96
CNTNAP3BQ96NU0 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
CNTNAP3BQ96NU0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CNTNAP3BQ96NU0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.23■■□□□ 1.95
CNTNAP3BQ96NU0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CNTNAP3BQ96NU0 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
CNTNAP3BQ96NU0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
CNTNAP3BQ96NU0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CNTNAP3BQ96NU0 EBPL-202ENST00000378268 680 ntTSL 3 BASIC27.13■■□□□ 1.93
CNTNAP3BQ96NU0 MIR639-201ENST00000384974 98 ntBASIC27.13■■□□□ 1.93
CNTNAP3BQ96NU0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CNTNAP3BQ96NU0 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
CNTNAP3BQ96NU0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.08■■□□□ 1.93
CNTNAP3BQ96NU0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.07■■□□□ 1.92
CNTNAP3BQ96NU0 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
CNTNAP3BQ96NU0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CNTNAP3BQ96NU0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.06■■□□□ 1.92
CNTNAP3BQ96NU0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
CNTNAP3BQ96NU0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
CNTNAP3BQ96NU0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.03■■□□□ 1.92
CNTNAP3BQ96NU0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.03■■□□□ 1.92
CNTNAP3BQ96NU0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.01■■□□□ 1.91
CNTNAP3BQ96NU0 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.01■■□□□ 1.91
CNTNAP3BQ96NU0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27■■□□□ 1.91
CNTNAP3BQ96NU0 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CNTNAP3BQ96NU0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27■■□□□ 1.91
CNTNAP3BQ96NU0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27■■□□□ 1.91
CNTNAP3BQ96NU0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CNTNAP3BQ96NU0 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
CNTNAP3BQ96NU0 AL133380.1-201ENST00000506013 324 ntBASIC26.98■■□□□ 1.91
CNTNAP3BQ96NU0 AC005559.1-201ENST00000589661 871 ntBASIC26.98■■□□□ 1.91
CNTNAP3BQ96NU0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.97■■□□□ 1.91
CNTNAP3BQ96NU0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CNTNAP3BQ96NU0 MIR762-201ENST00000390236 83 ntBASIC26.95■■□□□ 1.9
CNTNAP3BQ96NU0 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.94■■□□□ 1.9
CNTNAP3BQ96NU0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CNTNAP3BQ96NU0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.93■■□□□ 1.9
CNTNAP3BQ96NU0 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CNTNAP3BQ96NU0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CNTNAP3BQ96NU0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CNTNAP3BQ96NU0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.87■■□□□ 1.89
CNTNAP3BQ96NU0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CNTNAP3BQ96NU0 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.87■■□□□ 1.89
CNTNAP3BQ96NU0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.86■■□□□ 1.89
CNTNAP3BQ96NU0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
CNTNAP3BQ96NU0 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
CNTNAP3BQ96NU0 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CNTNAP3BQ96NU0 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CNTNAP3BQ96NU0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CNTNAP3BQ96NU0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
CNTNAP3BQ96NU0 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
CNTNAP3BQ96NU0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CNTNAP3BQ96NU0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CNTNAP3BQ96NU0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CNTNAP3BQ96NU0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CNTNAP3BQ96NU0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.77■■□□□ 1.88
CNTNAP3BQ96NU0 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CNTNAP3BQ96NU0 AC016575.1-201ENST00000607026 382 ntBASIC26.76■■□□□ 1.87
CNTNAP3BQ96NU0 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
CNTNAP3BQ96NU0 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
CNTNAP3BQ96NU0 DUX4L29-201ENST00000425409 679 ntBASIC26.7■■□□□ 1.86
CNTNAP3BQ96NU0 MIR3648-2-201ENST00000581792 180 ntBASIC26.7■■□□□ 1.86
CNTNAP3BQ96NU0 MIR3648-1-201ENST00000615959 180 ntBASIC26.7■■□□□ 1.86
CNTNAP3BQ96NU0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.68■■□□□ 1.86
CNTNAP3BQ96NU0 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CNTNAP3BQ96NU0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
CNTNAP3BQ96NU0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CNTNAP3BQ96NU0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.65■■□□□ 1.86
CNTNAP3BQ96NU0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.64■■□□□ 1.86
CNTNAP3BQ96NU0 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.64■■□□□ 1.86
CNTNAP3BQ96NU0 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC26.64■■□□□ 1.86
CNTNAP3BQ96NU0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.63■■□□□ 1.85
CNTNAP3BQ96NU0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CNTNAP3BQ96NU0 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms