Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SLC46A1Q96NT5 AL162393.1-201ENST00000437852 946 ntBASIC26.93■■□□□ 1.9
SLC46A1Q96NT5 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SLC46A1Q96NT5 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SLC46A1Q96NT5 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
SLC46A1Q96NT5 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SLC46A1Q96NT5 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.91■■□□□ 1.9
SLC46A1Q96NT5 AP006261.1-201ENST00000584783 668 ntBASIC26.91■■□□□ 1.9
SLC46A1Q96NT5 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SLC46A1Q96NT5 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.9■■□□□ 1.9
SLC46A1Q96NT5 AL391121.1-201ENST00000607967 1349 ntBASIC26.9■■□□□ 1.9
SLC46A1Q96NT5 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SLC46A1Q96NT5 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.88■■□□□ 1.89
SLC46A1Q96NT5 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
SLC46A1Q96NT5 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SLC46A1Q96NT5 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SLC46A1Q96NT5 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
SLC46A1Q96NT5 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
SLC46A1Q96NT5 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SLC46A1Q96NT5 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
SLC46A1Q96NT5 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SLC46A1Q96NT5 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SLC46A1Q96NT5 AL133380.1-201ENST00000506013 324 ntBASIC26.81■■□□□ 1.88
SLC46A1Q96NT5 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.8■■□□□ 1.88
SLC46A1Q96NT5 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SLC46A1Q96NT5 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SLC46A1Q96NT5 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
SLC46A1Q96NT5 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
SLC46A1Q96NT5 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.75■■□□□ 1.87
SLC46A1Q96NT5 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.75■■□□□ 1.87
SLC46A1Q96NT5 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
SLC46A1Q96NT5 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SLC46A1Q96NT5 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
SLC46A1Q96NT5 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.68■■□□□ 1.86
SLC46A1Q96NT5 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.67■■□□□ 1.86
SLC46A1Q96NT5 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.66■■□□□ 1.86
SLC46A1Q96NT5 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.66■■□□□ 1.86
SLC46A1Q96NT5 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.66■■□□□ 1.86
SLC46A1Q96NT5 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SLC46A1Q96NT5 MIR3665-201ENST00000578708 105 ntBASIC26.66■■□□□ 1.86
SLC46A1Q96NT5 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SLC46A1Q96NT5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.65■■□□□ 1.86
SLC46A1Q96NT5 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SLC46A1Q96NT5 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SLC46A1Q96NT5 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
SLC46A1Q96NT5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.63■■□□□ 1.85
SLC46A1Q96NT5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
SLC46A1Q96NT5 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.63■■□□□ 1.85
SLC46A1Q96NT5 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.62■■□□□ 1.85
SLC46A1Q96NT5 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.61■■□□□ 1.85
SLC46A1Q96NT5 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
SLC46A1Q96NT5 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SLC46A1Q96NT5 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SLC46A1Q96NT5 ABHD17AP4-201ENST00000411545 909 ntBASIC26.58■■□□□ 1.85
SLC46A1Q96NT5 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
SLC46A1Q96NT5 MIR7108-201ENST00000614319 87 ntBASIC26.54■■□□□ 1.84
SLC46A1Q96NT5 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SLC46A1Q96NT5 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SLC46A1Q96NT5 AC087741.3-201ENST00000624270 1347 ntBASIC26.52■■□□□ 1.84
SLC46A1Q96NT5 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SLC46A1Q96NT5 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SLC46A1Q96NT5 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.49■■□□□ 1.83
SLC46A1Q96NT5 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SLC46A1Q96NT5 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.48■■□□□ 1.83
SLC46A1Q96NT5 DUX4L28-201ENST00000623687 678 ntBASIC26.48■■□□□ 1.83
SLC46A1Q96NT5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.47■■□□□ 1.83
SLC46A1Q96NT5 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
SLC46A1Q96NT5 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.44■■□□□ 1.82
SLC46A1Q96NT5 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SLC46A1Q96NT5 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SLC46A1Q96NT5 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SLC46A1Q96NT5 MIR762-201ENST00000390236 83 ntBASIC26.43■■□□□ 1.82
SLC46A1Q96NT5 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.43■■□□□ 1.82
SLC46A1Q96NT5 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
SLC46A1Q96NT5 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SLC46A1Q96NT5 AC044849.2-201ENST00000606596 710 ntBASIC26.42■■□□□ 1.82
SLC46A1Q96NT5 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.4■■□□□ 1.82
SLC46A1Q96NT5 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.4■■□□□ 1.82
SLC46A1Q96NT5 AC005559.1-201ENST00000589661 871 ntBASIC26.39■■□□□ 1.82
SLC46A1Q96NT5 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SLC46A1Q96NT5 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SLC46A1Q96NT5 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SLC46A1Q96NT5 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.37■■□□□ 1.81
SLC46A1Q96NT5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
SLC46A1Q96NT5 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.35■■□□□ 1.81
SLC46A1Q96NT5 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SLC46A1Q96NT5 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.34■■□□□ 1.81
SLC46A1Q96NT5 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.34■■□□□ 1.81
SLC46A1Q96NT5 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SLC46A1Q96NT5 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SLC46A1Q96NT5 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SLC46A1Q96NT5 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.3■■□□□ 1.8
SLC46A1Q96NT5 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
SLC46A1Q96NT5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SLC46A1Q96NT5 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.28■■□□□ 1.8
SLC46A1Q96NT5 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.28■■□□□ 1.8
SLC46A1Q96NT5 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SLC46A1Q96NT5 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SLC46A1Q96NT5 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
SLC46A1Q96NT5 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 1038.7 ms