Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SLC46A1Q96NT5 AL162393.1-201ENST00000437852 946 ntBASIC26.93■■□□□ 1.9
SLC46A1Q96NT5 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SLC46A1Q96NT5 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SLC46A1Q96NT5 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
SLC46A1Q96NT5 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SLC46A1Q96NT5 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.91■■□□□ 1.9
SLC46A1Q96NT5 AP006261.1-201ENST00000584783 668 ntBASIC26.91■■□□□ 1.9
SLC46A1Q96NT5 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SLC46A1Q96NT5 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.9■■□□□ 1.9
SLC46A1Q96NT5 AL391121.1-201ENST00000607967 1349 ntBASIC26.9■■□□□ 1.9
SLC46A1Q96NT5 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SLC46A1Q96NT5 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.88■■□□□ 1.89
SLC46A1Q96NT5 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
SLC46A1Q96NT5 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SLC46A1Q96NT5 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SLC46A1Q96NT5 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
SLC46A1Q96NT5 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
SLC46A1Q96NT5 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SLC46A1Q96NT5 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
SLC46A1Q96NT5 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SLC46A1Q96NT5 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SLC46A1Q96NT5 AL133380.1-201ENST00000506013 324 ntBASIC26.81■■□□□ 1.88
SLC46A1Q96NT5 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.8■■□□□ 1.88
SLC46A1Q96NT5 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SLC46A1Q96NT5 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SLC46A1Q96NT5 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
SLC46A1Q96NT5 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
SLC46A1Q96NT5 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.75■■□□□ 1.87
SLC46A1Q96NT5 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.75■■□□□ 1.87
SLC46A1Q96NT5 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
SLC46A1Q96NT5 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SLC46A1Q96NT5 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
SLC46A1Q96NT5 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.68■■□□□ 1.86
SLC46A1Q96NT5 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.67■■□□□ 1.86
SLC46A1Q96NT5 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.66■■□□□ 1.86
SLC46A1Q96NT5 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.66■■□□□ 1.86
SLC46A1Q96NT5 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.66■■□□□ 1.86
SLC46A1Q96NT5 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SLC46A1Q96NT5 MIR3665-201ENST00000578708 105 ntBASIC26.66■■□□□ 1.86
SLC46A1Q96NT5 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SLC46A1Q96NT5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.65■■□□□ 1.86
SLC46A1Q96NT5 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SLC46A1Q96NT5 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SLC46A1Q96NT5 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
SLC46A1Q96NT5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.63■■□□□ 1.85
SLC46A1Q96NT5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
SLC46A1Q96NT5 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.63■■□□□ 1.85
SLC46A1Q96NT5 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.62■■□□□ 1.85
SLC46A1Q96NT5 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.61■■□□□ 1.85
SLC46A1Q96NT5 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
SLC46A1Q96NT5 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SLC46A1Q96NT5 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SLC46A1Q96NT5 ABHD17AP4-201ENST00000411545 909 ntBASIC26.58■■□□□ 1.85
SLC46A1Q96NT5 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
SLC46A1Q96NT5 MIR7108-201ENST00000614319 87 ntBASIC26.54■■□□□ 1.84
SLC46A1Q96NT5 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SLC46A1Q96NT5 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SLC46A1Q96NT5 AC087741.3-201ENST00000624270 1347 ntBASIC26.52■■□□□ 1.84
SLC46A1Q96NT5 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SLC46A1Q96NT5 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SLC46A1Q96NT5 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.49■■□□□ 1.83
SLC46A1Q96NT5 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SLC46A1Q96NT5 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.48■■□□□ 1.83
SLC46A1Q96NT5 DUX4L28-201ENST00000623687 678 ntBASIC26.48■■□□□ 1.83
SLC46A1Q96NT5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.47■■□□□ 1.83
SLC46A1Q96NT5 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
SLC46A1Q96NT5 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.44■■□□□ 1.82
SLC46A1Q96NT5 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SLC46A1Q96NT5 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SLC46A1Q96NT5 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SLC46A1Q96NT5 MIR762-201ENST00000390236 83 ntBASIC26.43■■□□□ 1.82
SLC46A1Q96NT5 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.43■■□□□ 1.82
SLC46A1Q96NT5 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
SLC46A1Q96NT5 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SLC46A1Q96NT5 AC044849.2-201ENST00000606596 710 ntBASIC26.42■■□□□ 1.82
SLC46A1Q96NT5 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.4■■□□□ 1.82
SLC46A1Q96NT5 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.4■■□□□ 1.82
SLC46A1Q96NT5 AC005559.1-201ENST00000589661 871 ntBASIC26.39■■□□□ 1.82
SLC46A1Q96NT5 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SLC46A1Q96NT5 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SLC46A1Q96NT5 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SLC46A1Q96NT5 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.37■■□□□ 1.81
SLC46A1Q96NT5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
SLC46A1Q96NT5 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.35■■□□□ 1.81
SLC46A1Q96NT5 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SLC46A1Q96NT5 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.34■■□□□ 1.81
SLC46A1Q96NT5 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.34■■□□□ 1.81
SLC46A1Q96NT5 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SLC46A1Q96NT5 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SLC46A1Q96NT5 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SLC46A1Q96NT5 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.3■■□□□ 1.8
SLC46A1Q96NT5 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
SLC46A1Q96NT5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SLC46A1Q96NT5 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.28■■□□□ 1.8
SLC46A1Q96NT5 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.28■■□□□ 1.8
SLC46A1Q96NT5 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SLC46A1Q96NT5 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SLC46A1Q96NT5 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
SLC46A1Q96NT5 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms