Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 AL133380.1-201ENST00000506013 324 ntBASIC28.79■■■□□ 2.2
CLDN23Q96B33 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.78■■■□□ 2.2
CLDN23Q96B33 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CLDN23Q96B33 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CLDN23Q96B33 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CLDN23Q96B33 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CLDN23Q96B33 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC28.7■■■□□ 2.19
CLDN23Q96B33 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
CLDN23Q96B33 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CLDN23Q96B33 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CLDN23Q96B33 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC28.69■■■□□ 2.18
CLDN23Q96B33 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC28.68■■■□□ 2.18
CLDN23Q96B33 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
CLDN23Q96B33 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
CLDN23Q96B33 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CLDN23Q96B33 MIR3665-201ENST00000578708 105 ntBASIC28.67■■■□□ 2.18
CLDN23Q96B33 ABHD17AP4-201ENST00000411545 909 ntBASIC28.66■■■□□ 2.18
CLDN23Q96B33 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.66■■■□□ 2.18
CLDN23Q96B33 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC28.65■■■□□ 2.18
CLDN23Q96B33 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC28.64■■■□□ 2.18
CLDN23Q96B33 EBPL-202ENST00000378268 680 ntTSL 3 BASIC28.63■■■□□ 2.17
CLDN23Q96B33 MIR7108-201ENST00000614319 87 ntBASIC28.63■■■□□ 2.17
CLDN23Q96B33 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CLDN23Q96B33 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC28.57■■■□□ 2.16
CLDN23Q96B33 AC087741.3-201ENST00000624270 1347 ntBASIC28.55■■■□□ 2.16
CLDN23Q96B33 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.55■■■□□ 2.16
CLDN23Q96B33 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CLDN23Q96B33 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC28.55■■■□□ 2.16
CLDN23Q96B33 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CLDN23Q96B33 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CLDN23Q96B33 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CLDN23Q96B33 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC28.53■■■□□ 2.16
CLDN23Q96B33 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC28.52■■■□□ 2.16
CLDN23Q96B33 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CLDN23Q96B33 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
CLDN23Q96B33 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
CLDN23Q96B33 DUX4L28-201ENST00000623687 678 ntBASIC28.49■■■□□ 2.15
CLDN23Q96B33 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CLDN23Q96B33 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC28.46■■■□□ 2.15
CLDN23Q96B33 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.46■■■□□ 2.15
CLDN23Q96B33 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.46■■■□□ 2.15
CLDN23Q96B33 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.45■■■□□ 2.14
CLDN23Q96B33 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.43■■■□□ 2.14
CLDN23Q96B33 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
CLDN23Q96B33 AC044849.2-201ENST00000606596 710 ntBASIC28.41■■■□□ 2.14
CLDN23Q96B33 MIR762-201ENST00000390236 83 ntBASIC28.4■■■□□ 2.14
CLDN23Q96B33 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CLDN23Q96B33 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC28.37■■■□□ 2.13
CLDN23Q96B33 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
CLDN23Q96B33 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CLDN23Q96B33 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CLDN23Q96B33 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.34■■■□□ 2.13
CLDN23Q96B33 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.34■■■□□ 2.13
CLDN23Q96B33 AC005559.1-201ENST00000589661 871 ntBASIC28.34■■■□□ 2.13
CLDN23Q96B33 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
CLDN23Q96B33 HLA-V-202ENST00000446817 847 ntBASIC28.32■■■□□ 2.12
CLDN23Q96B33 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.31■■■□□ 2.12
CLDN23Q96B33 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.3■■■□□ 2.12
CLDN23Q96B33 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC28.29■■■□□ 2.12
CLDN23Q96B33 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.29■■■□□ 2.12
CLDN23Q96B33 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
CLDN23Q96B33 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC28.28■■■□□ 2.12
CLDN23Q96B33 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.28■■■□□ 2.12
CLDN23Q96B33 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CLDN23Q96B33 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.24■■■□□ 2.11
CLDN23Q96B33 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.24■■■□□ 2.11
CLDN23Q96B33 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.22■■■□□ 2.11
CLDN23Q96B33 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CLDN23Q96B33 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CLDN23Q96B33 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CLDN23Q96B33 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.18■■■□□ 2.1
CLDN23Q96B33 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.18■■■□□ 2.1
CLDN23Q96B33 ZNRF2P2-203ENST00000454624 420 ntBASIC28.18■■■□□ 2.1
CLDN23Q96B33 DENR-202ENST00000455982 1052 ntTSL 5 BASIC28.18■■■□□ 2.1
CLDN23Q96B33 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC28.18■■■□□ 2.1
CLDN23Q96B33 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CLDN23Q96B33 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CLDN23Q96B33 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CLDN23Q96B33 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.16■■■□□ 2.1
CLDN23Q96B33 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.16■■■□□ 2.1
CLDN23Q96B33 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CLDN23Q96B33 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
CLDN23Q96B33 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
CLDN23Q96B33 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CLDN23Q96B33 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CLDN23Q96B33 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC28.13■■■□□ 2.09
CLDN23Q96B33 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CLDN23Q96B33 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.11■■■□□ 2.09
CLDN23Q96B33 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC28.1■■■□□ 2.09
CLDN23Q96B33 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.1■■■□□ 2.09
CLDN23Q96B33 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CLDN23Q96B33 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CLDN23Q96B33 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CLDN23Q96B33 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CLDN23Q96B33 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.05■■■□□ 2.08
CLDN23Q96B33 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CLDN23Q96B33 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.04■■■□□ 2.08
CLDN23Q96B33 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
CLDN23Q96B33 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.02■■■□□ 2.08
CLDN23Q96B33 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.01■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms