Protein–RNA interactions for Protein: Q8WZ73

RFFL, E3 ubiquitin-protein ligase rififylin, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFFLQ8WZ73 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC29.52■■■□□ 2.32
RFFLQ8WZ73 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
RFFLQ8WZ73 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
RFFLQ8WZ73 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RFFLQ8WZ73 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC29.48■■■□□ 2.31
RFFLQ8WZ73 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RFFLQ8WZ73 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
RFFLQ8WZ73 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.46■■■□□ 2.31
RFFLQ8WZ73 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
RFFLQ8WZ73 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
RFFLQ8WZ73 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
RFFLQ8WZ73 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC29.45■■■□□ 2.31
RFFLQ8WZ73 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC29.45■■■□□ 2.3
RFFLQ8WZ73 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
RFFLQ8WZ73 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RFFLQ8WZ73 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
RFFLQ8WZ73 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
RFFLQ8WZ73 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
RFFLQ8WZ73 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC29.42■■■□□ 2.3
RFFLQ8WZ73 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
RFFLQ8WZ73 AP002365.1-201ENST00000603448 772 ntBASIC29.41■■■□□ 2.3
RFFLQ8WZ73 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RFFLQ8WZ73 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
RFFLQ8WZ73 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.4■■■□□ 2.3
RFFLQ8WZ73 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RFFLQ8WZ73 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
RFFLQ8WZ73 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
RFFLQ8WZ73 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
RFFLQ8WZ73 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.38■■■□□ 2.29
RFFLQ8WZ73 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.38■■■□□ 2.29
RFFLQ8WZ73 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC29.37■■■□□ 2.29
RFFLQ8WZ73 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RFFLQ8WZ73 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RFFLQ8WZ73 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC29.35■■■□□ 2.29
RFFLQ8WZ73 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RFFLQ8WZ73 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
RFFLQ8WZ73 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
RFFLQ8WZ73 AC120057.4-201ENST00000624722 1615 ntBASIC29.32■■■□□ 2.28
RFFLQ8WZ73 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
RFFLQ8WZ73 MVK-208ENST00000539696 608 ntTSL 5 BASIC29.31■■■□□ 2.28
RFFLQ8WZ73 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
RFFLQ8WZ73 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.3■■■□□ 2.28
RFFLQ8WZ73 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.3■■■□□ 2.28
RFFLQ8WZ73 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
RFFLQ8WZ73 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
RFFLQ8WZ73 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC29.27■■■□□ 2.28
RFFLQ8WZ73 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
RFFLQ8WZ73 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.25■■■□□ 2.27
RFFLQ8WZ73 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
RFFLQ8WZ73 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.24■■■□□ 2.27
RFFLQ8WZ73 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
RFFLQ8WZ73 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
RFFLQ8WZ73 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.2■■■□□ 2.27
RFFLQ8WZ73 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.2■■■□□ 2.26
RFFLQ8WZ73 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.2■■■□□ 2.26
RFFLQ8WZ73 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC29.19■■■□□ 2.26
RFFLQ8WZ73 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.18■■■□□ 2.26
RFFLQ8WZ73 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
RFFLQ8WZ73 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC29.17■■■□□ 2.26
RFFLQ8WZ73 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
RFFLQ8WZ73 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC29.15■■■□□ 2.26
RFFLQ8WZ73 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
RFFLQ8WZ73 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
RFFLQ8WZ73 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
RFFLQ8WZ73 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC29.12■■■□□ 2.25
RFFLQ8WZ73 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
RFFLQ8WZ73 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.11■■■□□ 2.25
RFFLQ8WZ73 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
RFFLQ8WZ73 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
RFFLQ8WZ73 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.07■■■□□ 2.24
RFFLQ8WZ73 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
RFFLQ8WZ73 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
RFFLQ8WZ73 DYNLL1-208ENST00000550178 581 ntBASIC29.06■■■□□ 2.24
RFFLQ8WZ73 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
RFFLQ8WZ73 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
RFFLQ8WZ73 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC29.03■■■□□ 2.24
RFFLQ8WZ73 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
RFFLQ8WZ73 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC29.02■■■□□ 2.24
RFFLQ8WZ73 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29■■■□□ 2.23
RFFLQ8WZ73 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29■■■□□ 2.23
RFFLQ8WZ73 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
RFFLQ8WZ73 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29■■■□□ 2.23
RFFLQ8WZ73 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
RFFLQ8WZ73 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC28.99■■■□□ 2.23
RFFLQ8WZ73 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
RFFLQ8WZ73 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.99■■■□□ 2.23
RFFLQ8WZ73 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
RFFLQ8WZ73 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RFFLQ8WZ73 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
RFFLQ8WZ73 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
RFFLQ8WZ73 EBPL-203ENST00000378270 579 ntTSL 2 BASIC28.95■■■□□ 2.22
RFFLQ8WZ73 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC28.94■■■□□ 2.22
RFFLQ8WZ73 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
RFFLQ8WZ73 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
RFFLQ8WZ73 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
RFFLQ8WZ73 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
RFFLQ8WZ73 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC28.9■■■□□ 2.22
RFFLQ8WZ73 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.9■■■□□ 2.22
RFFLQ8WZ73 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.88■■■□□ 2.21
RFFLQ8WZ73 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.87■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms