Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF138Q8WVD3 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF138Q8WVD3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.44■■□□□ 1.66
RNF138Q8WVD3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.43■■□□□ 1.66
RNF138Q8WVD3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.42■■□□□ 1.66
RNF138Q8WVD3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.42■■□□□ 1.66
RNF138Q8WVD3 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
RNF138Q8WVD3 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.4■■□□□ 1.66
RNF138Q8WVD3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.39■■□□□ 1.66
RNF138Q8WVD3 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.39■■□□□ 1.66
RNF138Q8WVD3 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNF138Q8WVD3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RNF138Q8WVD3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.37■■□□□ 1.65
RNF138Q8WVD3 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RNF138Q8WVD3 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.37■■□□□ 1.65
RNF138Q8WVD3 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
RNF138Q8WVD3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RNF138Q8WVD3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RNF138Q8WVD3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RNF138Q8WVD3 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC25.33■■□□□ 1.65
RNF138Q8WVD3 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.64
RNF138Q8WVD3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.32■■□□□ 1.64
RNF138Q8WVD3 RARRES2P7-201ENST00000567349 469 ntBASIC25.32■■□□□ 1.64
RNF138Q8WVD3 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RNF138Q8WVD3 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RNF138Q8WVD3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RNF138Q8WVD3 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
RNF138Q8WVD3 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
RNF138Q8WVD3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RNF138Q8WVD3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.28■■□□□ 1.64
RNF138Q8WVD3 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
RNF138Q8WVD3 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RNF138Q8WVD3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RNF138Q8WVD3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RNF138Q8WVD3 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.26■■□□□ 1.63
RNF138Q8WVD3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
RNF138Q8WVD3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RNF138Q8WVD3 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RNF138Q8WVD3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RNF138Q8WVD3 SETD8P1-201ENST00000623146 1180 ntBASIC25.22■■□□□ 1.63
RNF138Q8WVD3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
RNF138Q8WVD3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.21■■□□□ 1.63
RNF138Q8WVD3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RNF138Q8WVD3 AL133380.1-201ENST00000506013 324 ntBASIC25.21■■□□□ 1.63
RNF138Q8WVD3 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
RNF138Q8WVD3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.19■■□□□ 1.62
RNF138Q8WVD3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RNF138Q8WVD3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
RNF138Q8WVD3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.15■■□□□ 1.62
RNF138Q8WVD3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
RNF138Q8WVD3 AC136428.2-201ENST00000563187 214 ntBASIC25.14■■□□□ 1.62
RNF138Q8WVD3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RNF138Q8WVD3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.1■■□□□ 1.61
RNF138Q8WVD3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RNF138Q8WVD3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF138Q8WVD3 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF138Q8WVD3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RNF138Q8WVD3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.08■■□□□ 1.61
RNF138Q8WVD3 AC120057.4-201ENST00000624722 1615 ntBASIC25.07■■□□□ 1.6
RNF138Q8WVD3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RNF138Q8WVD3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.05■■□□□ 1.6
RNF138Q8WVD3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
RNF138Q8WVD3 AC097358.2-201ENST00000607541 1159 ntBASIC25.05■■□□□ 1.6
RNF138Q8WVD3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF138Q8WVD3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.04■■□□□ 1.6
RNF138Q8WVD3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RNF138Q8WVD3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF138Q8WVD3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RNF138Q8WVD3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.04■■□□□ 1.6
RNF138Q8WVD3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF138Q8WVD3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
RNF138Q8WVD3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF138Q8WVD3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.01■■□□□ 1.59
RNF138Q8WVD3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF138Q8WVD3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25■■□□□ 1.59
RNF138Q8WVD3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC24.99■■□□□ 1.59
RNF138Q8WVD3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RNF138Q8WVD3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC24.97■■□□□ 1.59
RNF138Q8WVD3 CAHM-201ENST00000604200 896 ntBASIC24.97■■□□□ 1.59
RNF138Q8WVD3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC24.96■■□□□ 1.59
RNF138Q8WVD3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
RNF138Q8WVD3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RNF138Q8WVD3 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RNF138Q8WVD3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RNF138Q8WVD3 WASH5P-204ENST00000632292 975 ntBASIC24.94■■□□□ 1.58
RNF138Q8WVD3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
RNF138Q8WVD3 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RNF138Q8WVD3 AL391121.1-201ENST00000607967 1349 ntBASIC24.93■■□□□ 1.58
RNF138Q8WVD3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
RNF138Q8WVD3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
RNF138Q8WVD3 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.93■■□□□ 1.58
RNF138Q8WVD3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RNF138Q8WVD3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RNF138Q8WVD3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RNF138Q8WVD3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RNF138Q8WVD3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
RNF138Q8WVD3 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC24.89■■□□□ 1.58
RNF138Q8WVD3 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC24.89■■□□□ 1.57
RNF138Q8WVD3 SUZ12P1-203ENST00000578195 985 ntBASIC24.88■■□□□ 1.57
RNF138Q8WVD3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms