Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
SNED1Q8TER0 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC34.89■■■■□ 3.18
SNED1Q8TER0 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
SNED1Q8TER0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
SNED1Q8TER0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC34.86■■■■□ 3.17
SNED1Q8TER0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
SNED1Q8TER0 HNRNPLP2-201ENST00000568980 1570 ntBASIC34.85■■■■□ 3.17
SNED1Q8TER0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
SNED1Q8TER0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC34.81■■■■□ 3.16
SNED1Q8TER0 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
SNED1Q8TER0 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC34.78■■■■□ 3.16
SNED1Q8TER0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC34.77■■■■□ 3.16
SNED1Q8TER0 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
SNED1Q8TER0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC34.72■■■■□ 3.15
SNED1Q8TER0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC34.72■■■■□ 3.15
SNED1Q8TER0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC34.7■■■■□ 3.15
SNED1Q8TER0 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
SNED1Q8TER0 EBPL-202ENST00000378268 680 ntTSL 3 BASIC34.64■■■■□ 3.14
SNED1Q8TER0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC34.64■■■■□ 3.14
SNED1Q8TER0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC34.64■■■■□ 3.14
SNED1Q8TER0 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
SNED1Q8TER0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC34.58■■■■□ 3.13
SNED1Q8TER0 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
SNED1Q8TER0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.13
SNED1Q8TER0 DUX4L28-201ENST00000623687 678 ntBASIC34.57■■■■□ 3.13
SNED1Q8TER0 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC34.56■■■■□ 3.12
SNED1Q8TER0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
SNED1Q8TER0 AC087741.3-201ENST00000624270 1347 ntBASIC34.55■■■■□ 3.12
SNED1Q8TER0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
SNED1Q8TER0 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC34.54■■■■□ 3.12
SNED1Q8TER0 MIR3665-201ENST00000578708 105 ntBASIC34.54■■■■□ 3.12
SNED1Q8TER0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC34.53■■■■□ 3.12
SNED1Q8TER0 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
SNED1Q8TER0 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
SNED1Q8TER0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
SNED1Q8TER0 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC34.47■■■■□ 3.11
SNED1Q8TER0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
SNED1Q8TER0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC34.47■■■■□ 3.11
SNED1Q8TER0 ABHD17AP4-201ENST00000411545 909 ntBASIC34.46■■■■□ 3.11
SNED1Q8TER0 MIR7108-201ENST00000614319 87 ntBASIC34.46■■■■□ 3.11
SNED1Q8TER0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC34.45■■■■□ 3.11
SNED1Q8TER0 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC34.43■■■■□ 3.1
SNED1Q8TER0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC34.42■■■■□ 3.1
SNED1Q8TER0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
SNED1Q8TER0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
SNED1Q8TER0 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
SNED1Q8TER0 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
SNED1Q8TER0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC34.37■■■■□ 3.09
SNED1Q8TER0 MIR762-201ENST00000390236 83 ntBASIC34.35■■■■□ 3.09
SNED1Q8TER0 CHML-205ENST00000638160 705 ntTSL 3 BASIC34.34■■■■□ 3.09
SNED1Q8TER0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
SNED1Q8TER0 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
SNED1Q8TER0 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC34.31■■■■□ 3.08
SNED1Q8TER0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC34.31■■■■□ 3.08
SNED1Q8TER0 AC044849.2-201ENST00000606596 710 ntBASIC34.29■■■■□ 3.08
SNED1Q8TER0 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
SNED1Q8TER0 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC34.28■■■■□ 3.08
SNED1Q8TER0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC34.27■■■■□ 3.08
SNED1Q8TER0 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
SNED1Q8TER0 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC34.26■■■■□ 3.08
SNED1Q8TER0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC34.26■■■■□ 3.07
SNED1Q8TER0 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC34.26■■■■□ 3.07
SNED1Q8TER0 AC005559.1-201ENST00000589661 871 ntBASIC34.23■■■■□ 3.07
SNED1Q8TER0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC34.22■■■■□ 3.07
SNED1Q8TER0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC34.21■■■■□ 3.07
SNED1Q8TER0 DENR-202ENST00000455982 1052 ntTSL 5 BASIC34.2■■■■□ 3.06
SNED1Q8TER0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC34.19■■■■□ 3.06
SNED1Q8TER0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC34.19■■■■□ 3.06
SNED1Q8TER0 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC34.19■■■■□ 3.06
SNED1Q8TER0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC34.18■■■■□ 3.06
SNED1Q8TER0 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
SNED1Q8TER0 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC34.18■■■■□ 3.06
SNED1Q8TER0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC34.17■■■■□ 3.06
SNED1Q8TER0 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
SNED1Q8TER0 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
SNED1Q8TER0 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC34.16■■■■□ 3.06
SNED1Q8TER0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC34.15■■■■□ 3.06
SNED1Q8TER0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC34.15■■■■□ 3.06
SNED1Q8TER0 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC34.15■■■■□ 3.06
SNED1Q8TER0 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
SNED1Q8TER0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
SNED1Q8TER0 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
SNED1Q8TER0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC34.13■■■■□ 3.05
SNED1Q8TER0 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
SNED1Q8TER0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC34.11■■■■□ 3.05
SNED1Q8TER0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
SNED1Q8TER0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC34.1■■■■□ 3.05
SNED1Q8TER0 HLA-V-202ENST00000446817 847 ntBASIC34.09■■■■□ 3.05
SNED1Q8TER0 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC34.08■■■■□ 3.05
SNED1Q8TER0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC34.08■■■■□ 3.05
SNED1Q8TER0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
SNED1Q8TER0 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC34.05■■■■□ 3.04
SNED1Q8TER0 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
SNED1Q8TER0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC34.02■■■■□ 3.04
SNED1Q8TER0 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
SNED1Q8TER0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
SNED1Q8TER0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC33.99■■■■□ 3.03
SNED1Q8TER0 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
SNED1Q8TER0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
SNED1Q8TER0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC33.98■■■■□ 3.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms