Protein–RNA interactions for Protein: Q8NHX4

SPATA3, Spermatogenesis-associated protein 3, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA3Q8NHX4 AC087741.3-201ENST00000624270 1347 ntBASIC22.76■■□□□ 1.23
SPATA3Q8NHX4 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SPATA3Q8NHX4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SPATA3Q8NHX4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22.74■■□□□ 1.23
SPATA3Q8NHX4 AC044849.2-201ENST00000606596 710 ntBASIC22.74■■□□□ 1.23
SPATA3Q8NHX4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.73■■□□□ 1.23
SPATA3Q8NHX4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
SPATA3Q8NHX4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SPATA3Q8NHX4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SPATA3Q8NHX4 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC22.69■■□□□ 1.22
SPATA3Q8NHX4 ZNRF2P2-203ENST00000454624 420 ntBASIC22.69■■□□□ 1.22
SPATA3Q8NHX4 MIR4449-201ENST00000578365 66 ntBASIC22.69■■□□□ 1.22
SPATA3Q8NHX4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
SPATA3Q8NHX4 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC22.67■■□□□ 1.22
SPATA3Q8NHX4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SPATA3Q8NHX4 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
SPATA3Q8NHX4 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPATA3Q8NHX4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SPATA3Q8NHX4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.64■■□□□ 1.21
SPATA3Q8NHX4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.64■■□□□ 1.21
SPATA3Q8NHX4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SPATA3Q8NHX4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SPATA3Q8NHX4 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SPATA3Q8NHX4 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC22.62■■□□□ 1.21
SPATA3Q8NHX4 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SPATA3Q8NHX4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
SPATA3Q8NHX4 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC22.59■■□□□ 1.21
SPATA3Q8NHX4 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC22.59■■□□□ 1.21
SPATA3Q8NHX4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.58■■□□□ 1.21
SPATA3Q8NHX4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SPATA3Q8NHX4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
SPATA3Q8NHX4 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
SPATA3Q8NHX4 DUX4L28-201ENST00000623687 678 ntBASIC22.56■■□□□ 1.2
SPATA3Q8NHX4 HSD17B1P1-201ENST00000590052 955 ntBASIC22.54■■□□□ 1.2
SPATA3Q8NHX4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.53■■□□□ 1.2
SPATA3Q8NHX4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SPATA3Q8NHX4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC22.5■■□□□ 1.19
SPATA3Q8NHX4 MIR639-201ENST00000384974 98 ntBASIC22.49■■□□□ 1.19
SPATA3Q8NHX4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.49■■□□□ 1.19
SPATA3Q8NHX4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.48■■□□□ 1.19
SPATA3Q8NHX4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SPATA3Q8NHX4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SPATA3Q8NHX4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.46■■□□□ 1.19
SPATA3Q8NHX4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
SPATA3Q8NHX4 CHML-205ENST00000638160 705 ntTSL 3 BASIC22.45■■□□□ 1.18
SPATA3Q8NHX4 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
SPATA3Q8NHX4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
SPATA3Q8NHX4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.44■■□□□ 1.18
SPATA3Q8NHX4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.43■■□□□ 1.18
SPATA3Q8NHX4 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SPATA3Q8NHX4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SPATA3Q8NHX4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.42■■□□□ 1.18
SPATA3Q8NHX4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SPATA3Q8NHX4 AC005559.1-201ENST00000589661 871 ntBASIC22.38■■□□□ 1.17
SPATA3Q8NHX4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SPATA3Q8NHX4 AL133380.1-201ENST00000506013 324 ntBASIC22.37■■□□□ 1.17
SPATA3Q8NHX4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.36■■□□□ 1.17
SPATA3Q8NHX4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
SPATA3Q8NHX4 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
SPATA3Q8NHX4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.34■■□□□ 1.17
SPATA3Q8NHX4 MIR762-201ENST00000390236 83 ntBASIC22.33■■□□□ 1.17
SPATA3Q8NHX4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SPATA3Q8NHX4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.33■■□□□ 1.17
SPATA3Q8NHX4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
SPATA3Q8NHX4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SPATA3Q8NHX4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SPATA3Q8NHX4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SPATA3Q8NHX4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.31■■□□□ 1.16
SPATA3Q8NHX4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
SPATA3Q8NHX4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPATA3Q8NHX4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPATA3Q8NHX4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
SPATA3Q8NHX4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.25■■□□□ 1.15
SPATA3Q8NHX4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SPATA3Q8NHX4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.23■■□□□ 1.15
SPATA3Q8NHX4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.23■■□□□ 1.15
SPATA3Q8NHX4 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SPATA3Q8NHX4 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SPATA3Q8NHX4 MVK-208ENST00000539696 608 ntTSL 5 BASIC22.2■■□□□ 1.14
SPATA3Q8NHX4 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.19■■□□□ 1.14
SPATA3Q8NHX4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.17■■□□□ 1.14
SPATA3Q8NHX4 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
SPATA3Q8NHX4 DUX4L29-201ENST00000425409 679 ntBASIC22.15■■□□□ 1.14
SPATA3Q8NHX4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SPATA3Q8NHX4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SPATA3Q8NHX4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SPATA3Q8NHX4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.13■■□□□ 1.13
SPATA3Q8NHX4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SPATA3Q8NHX4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SPATA3Q8NHX4 MIR3648-2-201ENST00000581792 180 ntBASIC22.11■■□□□ 1.13
SPATA3Q8NHX4 MIR3648-1-201ENST00000615959 180 ntBASIC22.11■■□□□ 1.13
SPATA3Q8NHX4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC22.11■■□□□ 1.13
SPATA3Q8NHX4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SPATA3Q8NHX4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SPATA3Q8NHX4 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
SPATA3Q8NHX4 AC016575.1-201ENST00000607026 382 ntBASIC22.1■■□□□ 1.13
SPATA3Q8NHX4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SPATA3Q8NHX4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC22.09■■□□□ 1.13
SPATA3Q8NHX4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SPATA3Q8NHX4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms