Protein–RNA interactions for Protein: Q8NG27

PJA1, E3 ubiquitin-protein ligase Praja-1, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PJA1Q8NG27 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC28.97■■■□□ 2.23
PJA1Q8NG27 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
PJA1Q8NG27 AC145285.7-201ENST00000614819 1539 ntBASIC28.96■■■□□ 2.23
PJA1Q8NG27 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC28.96■■■□□ 2.23
PJA1Q8NG27 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
PJA1Q8NG27 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
PJA1Q8NG27 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
PJA1Q8NG27 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
PJA1Q8NG27 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.92■■■□□ 2.22
PJA1Q8NG27 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC28.91■■■□□ 2.22
PJA1Q8NG27 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
PJA1Q8NG27 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
PJA1Q8NG27 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
PJA1Q8NG27 AL133380.1-201ENST00000506013 324 ntBASIC28.87■■■□□ 2.21
PJA1Q8NG27 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
PJA1Q8NG27 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
PJA1Q8NG27 MIR7108-201ENST00000614319 87 ntBASIC28.84■■■□□ 2.21
PJA1Q8NG27 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
PJA1Q8NG27 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
PJA1Q8NG27 ABHD17AP4-201ENST00000411545 909 ntBASIC28.81■■■□□ 2.2
PJA1Q8NG27 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
PJA1Q8NG27 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.81■■■□□ 2.2
PJA1Q8NG27 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC28.8■■■□□ 2.2
PJA1Q8NG27 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC28.8■■■□□ 2.2
PJA1Q8NG27 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC28.79■■■□□ 2.2
PJA1Q8NG27 MIR3665-201ENST00000578708 105 ntBASIC28.79■■■□□ 2.2
PJA1Q8NG27 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC28.78■■■□□ 2.2
PJA1Q8NG27 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PJA1Q8NG27 EBPL-202ENST00000378268 680 ntTSL 3 BASIC28.76■■■□□ 2.19
PJA1Q8NG27 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC28.76■■■□□ 2.19
PJA1Q8NG27 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PJA1Q8NG27 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
PJA1Q8NG27 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.7■■■□□ 2.18
PJA1Q8NG27 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC28.68■■■□□ 2.18
PJA1Q8NG27 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.68■■■□□ 2.18
PJA1Q8NG27 AC087741.3-201ENST00000624270 1347 ntBASIC28.68■■■□□ 2.18
PJA1Q8NG27 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
PJA1Q8NG27 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC28.66■■■□□ 2.18
PJA1Q8NG27 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
PJA1Q8NG27 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
PJA1Q8NG27 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
PJA1Q8NG27 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC28.62■■■□□ 2.17
PJA1Q8NG27 DUX4L28-201ENST00000623687 678 ntBASIC28.62■■■□□ 2.17
PJA1Q8NG27 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC28.6■■■□□ 2.17
PJA1Q8NG27 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC28.6■■■□□ 2.17
PJA1Q8NG27 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
PJA1Q8NG27 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
PJA1Q8NG27 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PJA1Q8NG27 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.58■■■□□ 2.17
PJA1Q8NG27 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.58■■■□□ 2.17
PJA1Q8NG27 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.16
PJA1Q8NG27 HLA-V-202ENST00000446817 847 ntBASIC28.57■■■□□ 2.16
PJA1Q8NG27 AC044849.2-201ENST00000606596 710 ntBASIC28.57■■■□□ 2.16
PJA1Q8NG27 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.57■■■□□ 2.16
PJA1Q8NG27 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.56■■■□□ 2.16
PJA1Q8NG27 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.55■■■□□ 2.16
PJA1Q8NG27 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.15
PJA1Q8NG27 MIR762-201ENST00000390236 83 ntBASIC28.5■■■□□ 2.15
PJA1Q8NG27 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.5■■■□□ 2.15
PJA1Q8NG27 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PJA1Q8NG27 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
PJA1Q8NG27 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.47■■■□□ 2.15
PJA1Q8NG27 AC005559.1-201ENST00000589661 871 ntBASIC28.47■■■□□ 2.15
PJA1Q8NG27 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PJA1Q8NG27 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC28.46■■■□□ 2.15
PJA1Q8NG27 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.46■■■□□ 2.15
PJA1Q8NG27 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PJA1Q8NG27 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
PJA1Q8NG27 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.45■■■□□ 2.14
PJA1Q8NG27 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
PJA1Q8NG27 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PJA1Q8NG27 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC28.41■■■□□ 2.14
PJA1Q8NG27 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PJA1Q8NG27 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PJA1Q8NG27 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.37■■■□□ 2.13
PJA1Q8NG27 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.36■■■□□ 2.13
PJA1Q8NG27 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.36■■■□□ 2.13
PJA1Q8NG27 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.35■■■□□ 2.13
PJA1Q8NG27 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.35■■■□□ 2.13
PJA1Q8NG27 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PJA1Q8NG27 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.34■■■□□ 2.13
PJA1Q8NG27 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
PJA1Q8NG27 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.33■■■□□ 2.13
PJA1Q8NG27 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC28.33■■■□□ 2.12
PJA1Q8NG27 ZNRF2P2-203ENST00000454624 420 ntBASIC28.32■■■□□ 2.12
PJA1Q8NG27 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC28.32■■■□□ 2.12
PJA1Q8NG27 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PJA1Q8NG27 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PJA1Q8NG27 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.3■■■□□ 2.12
PJA1Q8NG27 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.3■■■□□ 2.12
PJA1Q8NG27 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.27■■■□□ 2.12
PJA1Q8NG27 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
PJA1Q8NG27 DENR-202ENST00000455982 1052 ntTSL 5 BASIC28.25■■■□□ 2.11
PJA1Q8NG27 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PJA1Q8NG27 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
PJA1Q8NG27 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC28.23■■■□□ 2.11
PJA1Q8NG27 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PJA1Q8NG27 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PJA1Q8NG27 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
PJA1Q8NG27 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms