Protein–RNA interactions for Protein: Q8NER1

TRPV1, Transient receptor potential cation channel subfamily V member 1, humanhuman

Predictions only

Length 839 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1Q8NER1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
TRPV1Q8NER1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
TRPV1Q8NER1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.96■■■□□ 2.71
TRPV1Q8NER1 AP006261.1-201ENST00000584783 668 ntBASIC31.96■■■□□ 2.71
TRPV1Q8NER1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
TRPV1Q8NER1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
TRPV1Q8NER1 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.91■■■□□ 2.7
TRPV1Q8NER1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.89■■■□□ 2.7
TRPV1Q8NER1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
TRPV1Q8NER1 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
TRPV1Q8NER1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
TRPV1Q8NER1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
TRPV1Q8NER1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.84■■■□□ 2.69
TRPV1Q8NER1 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.84■■■□□ 2.69
TRPV1Q8NER1 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
TRPV1Q8NER1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
TRPV1Q8NER1 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
TRPV1Q8NER1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.76■■■□□ 2.67
TRPV1Q8NER1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.76■■■□□ 2.67
TRPV1Q8NER1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.73■■■□□ 2.67
TRPV1Q8NER1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.69■■■□□ 2.66
TRPV1Q8NER1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.68■■■□□ 2.66
TRPV1Q8NER1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.67■■■□□ 2.66
TRPV1Q8NER1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
TRPV1Q8NER1 MIR3665-201ENST00000578708 105 ntBASIC31.66■■■□□ 2.66
TRPV1Q8NER1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
TRPV1Q8NER1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
TRPV1Q8NER1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
TRPV1Q8NER1 ABHD17AP4-201ENST00000411545 909 ntBASIC31.63■■■□□ 2.65
TRPV1Q8NER1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.63■■■□□ 2.65
TRPV1Q8NER1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.63■■■□□ 2.65
TRPV1Q8NER1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.62■■■□□ 2.65
TRPV1Q8NER1 DUX4L28-201ENST00000623687 678 ntBASIC31.62■■■□□ 2.65
TRPV1Q8NER1 AC087741.3-201ENST00000624270 1347 ntBASIC31.62■■■□□ 2.65
TRPV1Q8NER1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
TRPV1Q8NER1 MIR7108-201ENST00000614319 87 ntBASIC31.59■■■□□ 2.65
TRPV1Q8NER1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
TRPV1Q8NER1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
TRPV1Q8NER1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.58■■■□□ 2.65
TRPV1Q8NER1 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
TRPV1Q8NER1 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
TRPV1Q8NER1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TRPV1Q8NER1 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TRPV1Q8NER1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
TRPV1Q8NER1 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TRPV1Q8NER1 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.55■■■□□ 2.64
TRPV1Q8NER1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
TRPV1Q8NER1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
TRPV1Q8NER1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.53■■■□□ 2.64
TRPV1Q8NER1 MIR762-201ENST00000390236 83 ntBASIC31.51■■■□□ 2.63
TRPV1Q8NER1 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.5■■■□□ 2.63
TRPV1Q8NER1 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
TRPV1Q8NER1 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.5■■■□□ 2.63
TRPV1Q8NER1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
TRPV1Q8NER1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.48■■■□□ 2.63
TRPV1Q8NER1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.47■■■□□ 2.63
TRPV1Q8NER1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.45■■■□□ 2.63
TRPV1Q8NER1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.45■■■□□ 2.62
TRPV1Q8NER1 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TRPV1Q8NER1 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
TRPV1Q8NER1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TRPV1Q8NER1 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TRPV1Q8NER1 AC005559.1-201ENST00000589661 871 ntBASIC31.41■■■□□ 2.62
TRPV1Q8NER1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
TRPV1Q8NER1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.4■■■□□ 2.62
TRPV1Q8NER1 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
TRPV1Q8NER1 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
TRPV1Q8NER1 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
TRPV1Q8NER1 AC044849.2-201ENST00000606596 710 ntBASIC31.38■■■□□ 2.61
TRPV1Q8NER1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TRPV1Q8NER1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.35■■■□□ 2.61
TRPV1Q8NER1 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
TRPV1Q8NER1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
TRPV1Q8NER1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.33■■■□□ 2.61
TRPV1Q8NER1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.33■■■□□ 2.61
TRPV1Q8NER1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.32■■■□□ 2.6
TRPV1Q8NER1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.32■■■□□ 2.6
TRPV1Q8NER1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
TRPV1Q8NER1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
TRPV1Q8NER1 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
TRPV1Q8NER1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TRPV1Q8NER1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.3■■■□□ 2.6
TRPV1Q8NER1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.29■■■□□ 2.6
TRPV1Q8NER1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.29■■■□□ 2.6
TRPV1Q8NER1 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TRPV1Q8NER1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.27■■■□□ 2.6
TRPV1Q8NER1 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
TRPV1Q8NER1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.25■■■□□ 2.59
TRPV1Q8NER1 HLA-V-202ENST00000446817 847 ntBASIC31.24■■■□□ 2.59
TRPV1Q8NER1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.24■■■□□ 2.59
TRPV1Q8NER1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
TRPV1Q8NER1 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
TRPV1Q8NER1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.19■■■□□ 2.58
TRPV1Q8NER1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.16■■■□□ 2.58
TRPV1Q8NER1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.16■■■□□ 2.58
TRPV1Q8NER1 ZNRF2P2-203ENST00000454624 420 ntBASIC31.16■■■□□ 2.58
TRPV1Q8NER1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.15■■■□□ 2.58
TRPV1Q8NER1 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
TRPV1Q8NER1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
TRPV1Q8NER1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms