Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
PRPF38AQ8NAV1 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC32.45■■■□□ 2.78
PRPF38AQ8NAV1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC32.45■■■□□ 2.78
PRPF38AQ8NAV1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
PRPF38AQ8NAV1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC32.44■■■□□ 2.78
PRPF38AQ8NAV1 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
PRPF38AQ8NAV1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC32.43■■■□□ 2.78
PRPF38AQ8NAV1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC32.43■■■□□ 2.78
PRPF38AQ8NAV1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC32.4■■■□□ 2.78
PRPF38AQ8NAV1 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
PRPF38AQ8NAV1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC32.39■■■□□ 2.78
PRPF38AQ8NAV1 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC32.39■■■□□ 2.78
PRPF38AQ8NAV1 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
PRPF38AQ8NAV1 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC32.38■■■□□ 2.77
PRPF38AQ8NAV1 AL133380.1-201ENST00000506013 324 ntBASIC32.38■■■□□ 2.77
PRPF38AQ8NAV1 CAHM-201ENST00000604200 896 ntBASIC32.37■■■□□ 2.77
PRPF38AQ8NAV1 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC32.36■■■□□ 2.77
PRPF38AQ8NAV1 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
PRPF38AQ8NAV1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
PRPF38AQ8NAV1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
PRPF38AQ8NAV1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
PRPF38AQ8NAV1 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
PRPF38AQ8NAV1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
PRPF38AQ8NAV1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC32.28■■■□□ 2.76
PRPF38AQ8NAV1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
PRPF38AQ8NAV1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
PRPF38AQ8NAV1 AL391121.1-201ENST00000607967 1349 ntBASIC32.26■■■□□ 2.75
PRPF38AQ8NAV1 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC32.24■■■□□ 2.75
PRPF38AQ8NAV1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC32.23■■■□□ 2.75
PRPF38AQ8NAV1 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
PRPF38AQ8NAV1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC32.22■■■□□ 2.75
PRPF38AQ8NAV1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC32.22■■■□□ 2.75
PRPF38AQ8NAV1 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
PRPF38AQ8NAV1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC32.19■■■□□ 2.74
PRPF38AQ8NAV1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC32.17■■■□□ 2.74
PRPF38AQ8NAV1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
PRPF38AQ8NAV1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC32.14■■■□□ 2.74
PRPF38AQ8NAV1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC32.14■■■□□ 2.74
PRPF38AQ8NAV1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
PRPF38AQ8NAV1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
PRPF38AQ8NAV1 RPS2P35-201ENST00000443417 897 ntBASIC32.11■■■□□ 2.73
PRPF38AQ8NAV1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
PRPF38AQ8NAV1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
PRPF38AQ8NAV1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC32.05■■■□□ 2.72
PRPF38AQ8NAV1 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
PRPF38AQ8NAV1 AP006261.1-201ENST00000584783 668 ntBASIC31.98■■■□□ 2.71
PRPF38AQ8NAV1 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PRPF38AQ8NAV1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
PRPF38AQ8NAV1 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PRPF38AQ8NAV1 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.95■■■□□ 2.7
PRPF38AQ8NAV1 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.94■■■□□ 2.7
PRPF38AQ8NAV1 AL162393.1-201ENST00000437852 946 ntBASIC31.94■■■□□ 2.7
PRPF38AQ8NAV1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.94■■■□□ 2.7
PRPF38AQ8NAV1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
PRPF38AQ8NAV1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.93■■■□□ 2.7
PRPF38AQ8NAV1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
PRPF38AQ8NAV1 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
PRPF38AQ8NAV1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.92■■■□□ 2.7
PRPF38AQ8NAV1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.92■■■□□ 2.7
PRPF38AQ8NAV1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
PRPF38AQ8NAV1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
PRPF38AQ8NAV1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
PRPF38AQ8NAV1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
PRPF38AQ8NAV1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.89■■■□□ 2.7
PRPF38AQ8NAV1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
PRPF38AQ8NAV1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
PRPF38AQ8NAV1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.87■■■□□ 2.69
PRPF38AQ8NAV1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
PRPF38AQ8NAV1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.84■■■□□ 2.69
PRPF38AQ8NAV1 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
PRPF38AQ8NAV1 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
PRPF38AQ8NAV1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.79■■■□□ 2.68
PRPF38AQ8NAV1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PRPF38AQ8NAV1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PRPF38AQ8NAV1 MIR3665-201ENST00000578708 105 ntBASIC31.78■■■□□ 2.68
PRPF38AQ8NAV1 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.77■■■□□ 2.68
PRPF38AQ8NAV1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
PRPF38AQ8NAV1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.77■■■□□ 2.68
PRPF38AQ8NAV1 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.77■■■□□ 2.68
PRPF38AQ8NAV1 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PRPF38AQ8NAV1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
PRPF38AQ8NAV1 WASH5P-204ENST00000632292 975 ntBASIC31.76■■■□□ 2.67
PRPF38AQ8NAV1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.75■■■□□ 2.67
PRPF38AQ8NAV1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PRPF38AQ8NAV1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
PRPF38AQ8NAV1 MIR762-201ENST00000390236 83 ntBASIC31.74■■■□□ 2.67
PRPF38AQ8NAV1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PRPF38AQ8NAV1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
PRPF38AQ8NAV1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
PRPF38AQ8NAV1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.69■■■□□ 2.66
PRPF38AQ8NAV1 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PRPF38AQ8NAV1 DUX4L28-201ENST00000623687 678 ntBASIC31.67■■■□□ 2.66
PRPF38AQ8NAV1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.66■■■□□ 2.66
PRPF38AQ8NAV1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
PRPF38AQ8NAV1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PRPF38AQ8NAV1 AC005559.1-201ENST00000589661 871 ntBASIC31.64■■■□□ 2.66
PRPF38AQ8NAV1 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
PRPF38AQ8NAV1 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
PRPF38AQ8NAV1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
PRPF38AQ8NAV1 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms