Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
VPS52Q8N1B4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
VPS52Q8N1B4 CAHM-201ENST00000604200 896 ntBASIC30.15■■■□□ 2.42
VPS52Q8N1B4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
VPS52Q8N1B4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
VPS52Q8N1B4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.14■■■□□ 2.42
VPS52Q8N1B4 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.13■■■□□ 2.41
VPS52Q8N1B4 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
VPS52Q8N1B4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
VPS52Q8N1B4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
VPS52Q8N1B4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
VPS52Q8N1B4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
VPS52Q8N1B4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
VPS52Q8N1B4 AL133380.1-201ENST00000506013 324 ntBASIC30.02■■■□□ 2.4
VPS52Q8N1B4 AL391121.1-201ENST00000607967 1349 ntBASIC30.01■■■□□ 2.4
VPS52Q8N1B4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC30■■■□□ 2.39
VPS52Q8N1B4 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
VPS52Q8N1B4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
VPS52Q8N1B4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
VPS52Q8N1B4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC29.98■■■□□ 2.39
VPS52Q8N1B4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.97■■■□□ 2.39
VPS52Q8N1B4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.93■■■□□ 2.38
VPS52Q8N1B4 AL162393.1-201ENST00000437852 946 ntBASIC29.92■■■□□ 2.38
VPS52Q8N1B4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC29.92■■■□□ 2.38
VPS52Q8N1B4 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
VPS52Q8N1B4 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.91■■■□□ 2.38
VPS52Q8N1B4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
VPS52Q8N1B4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.88■■■□□ 2.37
VPS52Q8N1B4 AP006261.1-201ENST00000584783 668 ntBASIC29.88■■■□□ 2.37
VPS52Q8N1B4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC29.88■■■□□ 2.37
VPS52Q8N1B4 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
VPS52Q8N1B4 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
VPS52Q8N1B4 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
VPS52Q8N1B4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
VPS52Q8N1B4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
VPS52Q8N1B4 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.84■■■□□ 2.37
VPS52Q8N1B4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.83■■■□□ 2.37
VPS52Q8N1B4 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
VPS52Q8N1B4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.82■■■□□ 2.36
VPS52Q8N1B4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.82■■■□□ 2.36
VPS52Q8N1B4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
VPS52Q8N1B4 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
VPS52Q8N1B4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
VPS52Q8N1B4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.8■■■□□ 2.36
VPS52Q8N1B4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
VPS52Q8N1B4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC29.8■■■□□ 2.36
VPS52Q8N1B4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
VPS52Q8N1B4 HNRNPLP2-201ENST00000568980 1570 ntBASIC29.8■■■□□ 2.36
VPS52Q8N1B4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
VPS52Q8N1B4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
VPS52Q8N1B4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
VPS52Q8N1B4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
VPS52Q8N1B4 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
VPS52Q8N1B4 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
VPS52Q8N1B4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
VPS52Q8N1B4 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
VPS52Q8N1B4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.73■■■□□ 2.35
VPS52Q8N1B4 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
VPS52Q8N1B4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.69■■■□□ 2.34
VPS52Q8N1B4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
VPS52Q8N1B4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
VPS52Q8N1B4 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
VPS52Q8N1B4 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
VPS52Q8N1B4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC29.65■■■□□ 2.34
VPS52Q8N1B4 MIR3665-201ENST00000578708 105 ntBASIC29.65■■■□□ 2.34
VPS52Q8N1B4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC29.64■■■□□ 2.34
VPS52Q8N1B4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
VPS52Q8N1B4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
VPS52Q8N1B4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.63■■■□□ 2.33
VPS52Q8N1B4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.6■■■□□ 2.33
VPS52Q8N1B4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
VPS52Q8N1B4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
VPS52Q8N1B4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.6■■■□□ 2.33
VPS52Q8N1B4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
VPS52Q8N1B4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
VPS52Q8N1B4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
VPS52Q8N1B4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.55■■■□□ 2.32
VPS52Q8N1B4 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.55■■■□□ 2.32
VPS52Q8N1B4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
VPS52Q8N1B4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
VPS52Q8N1B4 MIR762-201ENST00000390236 83 ntBASIC29.53■■■□□ 2.32
VPS52Q8N1B4 DUX4L28-201ENST00000623687 678 ntBASIC29.53■■■□□ 2.32
VPS52Q8N1B4 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
VPS52Q8N1B4 AC087741.3-201ENST00000624270 1347 ntBASIC29.51■■■□□ 2.32
VPS52Q8N1B4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.5■■■□□ 2.31
VPS52Q8N1B4 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.49■■■□□ 2.31
VPS52Q8N1B4 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
VPS52Q8N1B4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC29.47■■■□□ 2.31
VPS52Q8N1B4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.46■■■□□ 2.31
VPS52Q8N1B4 AC005559.1-201ENST00000589661 871 ntBASIC29.45■■■□□ 2.31
VPS52Q8N1B4 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
VPS52Q8N1B4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
VPS52Q8N1B4 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
VPS52Q8N1B4 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.43■■■□□ 2.3
VPS52Q8N1B4 ABHD17AP4-201ENST00000411545 909 ntBASIC29.43■■■□□ 2.3
VPS52Q8N1B4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
VPS52Q8N1B4 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
VPS52Q8N1B4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.41■■■□□ 2.3
VPS52Q8N1B4 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
VPS52Q8N1B4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms