Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC35.15■■■■□ 3.22
DDX60Q8IY21 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC35.1■■■■□ 3.21
DDX60Q8IY21 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
DDX60Q8IY21 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
DDX60Q8IY21 CAHM-201ENST00000604200 896 ntBASIC35.09■■■■□ 3.21
DDX60Q8IY21 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC35.06■■■■□ 3.2
DDX60Q8IY21 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC35.06■■■■□ 3.2
DDX60Q8IY21 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
DDX60Q8IY21 AL391121.1-201ENST00000607967 1349 ntBASIC35.06■■■■□ 3.2
DDX60Q8IY21 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
DDX60Q8IY21 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
DDX60Q8IY21 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC35.04■■■■□ 3.2
DDX60Q8IY21 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC35.04■■■■□ 3.2
DDX60Q8IY21 RPS2P35-201ENST00000443417 897 ntBASIC35.03■■■■□ 3.2
DDX60Q8IY21 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
DDX60Q8IY21 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC35.02■■■■□ 3.2
DDX60Q8IY21 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC35.02■■■■□ 3.2
DDX60Q8IY21 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
DDX60Q8IY21 AL162393.1-201ENST00000437852 946 ntBASIC35■■■■□ 3.19
DDX60Q8IY21 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC34.99■■■■□ 3.19
DDX60Q8IY21 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC34.99■■■■□ 3.19
DDX60Q8IY21 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
DDX60Q8IY21 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
DDX60Q8IY21 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC34.98■■■■□ 3.19
DDX60Q8IY21 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC34.97■■■■□ 3.19
DDX60Q8IY21 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
DDX60Q8IY21 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC34.9■■■■□ 3.18
DDX60Q8IY21 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC34.89■■■■□ 3.18
DDX60Q8IY21 HNRNPLP2-201ENST00000568980 1570 ntBASIC34.89■■■■□ 3.18
DDX60Q8IY21 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC34.88■■■■□ 3.17
DDX60Q8IY21 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
DDX60Q8IY21 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
DDX60Q8IY21 NRG1-221ENST00000614767 762 ntTSL 5 BASIC34.83■■■■□ 3.17
DDX60Q8IY21 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
DDX60Q8IY21 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC34.81■■■■□ 3.16
DDX60Q8IY21 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
DDX60Q8IY21 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC34.79■■■■□ 3.16
DDX60Q8IY21 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC34.78■■■■□ 3.16
DDX60Q8IY21 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC34.78■■■■□ 3.16
DDX60Q8IY21 EBPL-202ENST00000378268 680 ntTSL 3 BASIC34.77■■■■□ 3.16
DDX60Q8IY21 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
DDX60Q8IY21 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
DDX60Q8IY21 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
DDX60Q8IY21 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC34.7■■■■□ 3.15
DDX60Q8IY21 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC34.69■■■■□ 3.14
DDX60Q8IY21 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
DDX60Q8IY21 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
DDX60Q8IY21 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
DDX60Q8IY21 AP006261.1-201ENST00000584783 668 ntBASIC34.63■■■■□ 3.13
DDX60Q8IY21 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC34.61■■■■□ 3.13
DDX60Q8IY21 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
DDX60Q8IY21 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
DDX60Q8IY21 DUX4L28-201ENST00000623687 678 ntBASIC34.57■■■■□ 3.12
DDX60Q8IY21 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
DDX60Q8IY21 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC34.54■■■■□ 3.12
DDX60Q8IY21 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
DDX60Q8IY21 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC34.52■■■■□ 3.12
DDX60Q8IY21 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
DDX60Q8IY21 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
DDX60Q8IY21 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC34.49■■■■□ 3.11
DDX60Q8IY21 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC34.49■■■■□ 3.11
DDX60Q8IY21 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
DDX60Q8IY21 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC34.49■■■■□ 3.11
DDX60Q8IY21 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC34.49■■■■□ 3.11
DDX60Q8IY21 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
DDX60Q8IY21 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC34.47■■■■□ 3.11
DDX60Q8IY21 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
DDX60Q8IY21 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC34.47■■■■□ 3.11
DDX60Q8IY21 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
DDX60Q8IY21 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC34.44■■■■□ 3.1
DDX60Q8IY21 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC34.42■■■■□ 3.1
DDX60Q8IY21 DENR-202ENST00000455982 1052 ntTSL 5 BASIC34.41■■■■□ 3.1
DDX60Q8IY21 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC34.41■■■■□ 3.1
DDX60Q8IY21 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
DDX60Q8IY21 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
DDX60Q8IY21 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
DDX60Q8IY21 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
DDX60Q8IY21 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
DDX60Q8IY21 MIR3665-201ENST00000578708 105 ntBASIC34.38■■■■□ 3.09
DDX60Q8IY21 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
DDX60Q8IY21 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
DDX60Q8IY21 AC087741.3-201ENST00000624270 1347 ntBASIC34.37■■■■□ 3.09
DDX60Q8IY21 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC34.36■■■■□ 3.09
DDX60Q8IY21 MIR762-201ENST00000390236 83 ntBASIC34.36■■■■□ 3.09
DDX60Q8IY21 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
DDX60Q8IY21 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC34.35■■■■□ 3.09
DDX60Q8IY21 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC34.35■■■■□ 3.09
DDX60Q8IY21 AC005559.1-201ENST00000589661 871 ntBASIC34.35■■■■□ 3.09
DDX60Q8IY21 WASH5P-204ENST00000632292 975 ntBASIC34.33■■■■□ 3.09
DDX60Q8IY21 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC34.32■■■■□ 3.08
DDX60Q8IY21 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC34.32■■■■□ 3.08
DDX60Q8IY21 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
DDX60Q8IY21 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC34.28■■■■□ 3.08
DDX60Q8IY21 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC34.28■■■■□ 3.08
DDX60Q8IY21 CHML-205ENST00000638160 705 ntTSL 3 BASIC34.28■■■■□ 3.08
DDX60Q8IY21 AC044849.2-201ENST00000606596 710 ntBASIC34.27■■■■□ 3.08
DDX60Q8IY21 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC34.24■■■■□ 3.07
DDX60Q8IY21 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC34.23■■■■□ 3.07
DDX60Q8IY21 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
DDX60Q8IY21 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms