Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.58■■□□□ 1.69
RP1L1Q8IWN7 AC145285.7-201ENST00000614819 1539 ntBASIC25.58■■□□□ 1.69
RP1L1Q8IWN7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC25.58■■□□□ 1.69
RP1L1Q8IWN7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RP1L1Q8IWN7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.56■■□□□ 1.68
RP1L1Q8IWN7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.56■■□□□ 1.68
RP1L1Q8IWN7 MIR7108-201ENST00000614319 87 ntBASIC25.56■■□□□ 1.68
RP1L1Q8IWN7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RP1L1Q8IWN7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.54■■□□□ 1.68
RP1L1Q8IWN7 MIR3665-201ENST00000578708 105 ntBASIC25.54■■□□□ 1.68
RP1L1Q8IWN7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RP1L1Q8IWN7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RP1L1Q8IWN7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RP1L1Q8IWN7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RP1L1Q8IWN7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RP1L1Q8IWN7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.49■■□□□ 1.67
RP1L1Q8IWN7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
RP1L1Q8IWN7 MVK-208ENST00000539696 608 ntTSL 5 BASIC25.48■■□□□ 1.67
RP1L1Q8IWN7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RP1L1Q8IWN7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RP1L1Q8IWN7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RP1L1Q8IWN7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RP1L1Q8IWN7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
RP1L1Q8IWN7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RP1L1Q8IWN7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.41■■□□□ 1.66
RP1L1Q8IWN7 AC044849.2-201ENST00000606596 710 ntBASIC25.37■■□□□ 1.65
RP1L1Q8IWN7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.36■■□□□ 1.65
RP1L1Q8IWN7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RP1L1Q8IWN7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.33■■□□□ 1.65
RP1L1Q8IWN7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.31■■□□□ 1.64
RP1L1Q8IWN7 AC087741.3-201ENST00000624270 1347 ntBASIC25.3■■□□□ 1.64
RP1L1Q8IWN7 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RP1L1Q8IWN7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
RP1L1Q8IWN7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RP1L1Q8IWN7 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.27■■□□□ 1.64
RP1L1Q8IWN7 AL133380.1-201ENST00000506013 324 ntBASIC25.26■■□□□ 1.63
RP1L1Q8IWN7 MIR762-201ENST00000390236 83 ntBASIC25.25■■□□□ 1.63
RP1L1Q8IWN7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.25■■□□□ 1.63
RP1L1Q8IWN7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RP1L1Q8IWN7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
RP1L1Q8IWN7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RP1L1Q8IWN7 AC005559.1-201ENST00000589661 871 ntBASIC25.22■■□□□ 1.63
RP1L1Q8IWN7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
RP1L1Q8IWN7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.2■■□□□ 1.62
RP1L1Q8IWN7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
RP1L1Q8IWN7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.19■■□□□ 1.62
RP1L1Q8IWN7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.19■■□□□ 1.62
RP1L1Q8IWN7 DUX4L28-201ENST00000623687 678 ntBASIC25.19■■□□□ 1.62
RP1L1Q8IWN7 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RP1L1Q8IWN7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.17■■□□□ 1.62
RP1L1Q8IWN7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.17■■□□□ 1.62
RP1L1Q8IWN7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.16■■□□□ 1.62
RP1L1Q8IWN7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.16■■□□□ 1.62
RP1L1Q8IWN7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.15■■□□□ 1.62
RP1L1Q8IWN7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.14■■□□□ 1.62
RP1L1Q8IWN7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RP1L1Q8IWN7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.14■■□□□ 1.61
RP1L1Q8IWN7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RP1L1Q8IWN7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RP1L1Q8IWN7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.12■■□□□ 1.61
RP1L1Q8IWN7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.1■■□□□ 1.61
RP1L1Q8IWN7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RP1L1Q8IWN7 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RP1L1Q8IWN7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RP1L1Q8IWN7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RP1L1Q8IWN7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.05■■□□□ 1.6
RP1L1Q8IWN7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
RP1L1Q8IWN7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.05■■□□□ 1.6
RP1L1Q8IWN7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC25.05■■□□□ 1.6
RP1L1Q8IWN7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.05■■□□□ 1.6
RP1L1Q8IWN7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RP1L1Q8IWN7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.03■■□□□ 1.6
RP1L1Q8IWN7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RP1L1Q8IWN7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RP1L1Q8IWN7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RP1L1Q8IWN7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.03■■□□□ 1.6
RP1L1Q8IWN7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.02■■□□□ 1.6
RP1L1Q8IWN7 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
RP1L1Q8IWN7 MIR4449-201ENST00000578365 66 ntBASIC25.01■■□□□ 1.59
RP1L1Q8IWN7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25■■□□□ 1.59
RP1L1Q8IWN7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25■■□□□ 1.59
RP1L1Q8IWN7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25■■□□□ 1.59
RP1L1Q8IWN7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC24.98■■□□□ 1.59
RP1L1Q8IWN7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.97■■□□□ 1.59
RP1L1Q8IWN7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RP1L1Q8IWN7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RP1L1Q8IWN7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
RP1L1Q8IWN7 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
RP1L1Q8IWN7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RP1L1Q8IWN7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RP1L1Q8IWN7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RP1L1Q8IWN7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.92■■□□□ 1.58
RP1L1Q8IWN7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.92■■□□□ 1.58
RP1L1Q8IWN7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.91■■□□□ 1.58
RP1L1Q8IWN7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.91■■□□□ 1.58
RP1L1Q8IWN7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RP1L1Q8IWN7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RP1L1Q8IWN7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC24.89■■□□□ 1.58
RP1L1Q8IWN7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RP1L1Q8IWN7 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms