Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.74■■■□□ 2.19
FOXR1Q6PIV2 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC28.73■■■□□ 2.19
FOXR1Q6PIV2 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
FOXR1Q6PIV2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
FOXR1Q6PIV2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.72■■■□□ 2.19
FOXR1Q6PIV2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
FOXR1Q6PIV2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
FOXR1Q6PIV2 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
FOXR1Q6PIV2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
FOXR1Q6PIV2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
FOXR1Q6PIV2 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC28.67■■■□□ 2.18
FOXR1Q6PIV2 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
FOXR1Q6PIV2 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
FOXR1Q6PIV2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
FOXR1Q6PIV2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
FOXR1Q6PIV2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.66■■■□□ 2.18
FOXR1Q6PIV2 ABCB10P1-201ENST00000614297 2181 ntBASIC28.64■■■□□ 2.18
FOXR1Q6PIV2 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
FOXR1Q6PIV2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
FOXR1Q6PIV2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
FOXR1Q6PIV2 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
FOXR1Q6PIV2 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
FOXR1Q6PIV2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
FOXR1Q6PIV2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC28.58■■■□□ 2.17
FOXR1Q6PIV2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
FOXR1Q6PIV2 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.57■■■□□ 2.16
FOXR1Q6PIV2 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
FOXR1Q6PIV2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.57■■■□□ 2.16
FOXR1Q6PIV2 ABCB10P3-201ENST00000561950 2166 ntBASIC28.55■■■□□ 2.16
FOXR1Q6PIV2 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC28.55■■■□□ 2.16
FOXR1Q6PIV2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
FOXR1Q6PIV2 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC28.52■■■□□ 2.16
FOXR1Q6PIV2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
FOXR1Q6PIV2 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.51■■■□□ 2.15
FOXR1Q6PIV2 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
FOXR1Q6PIV2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.49■■■□□ 2.15
FOXR1Q6PIV2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
FOXR1Q6PIV2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
FOXR1Q6PIV2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC28.47■■■□□ 2.15
FOXR1Q6PIV2 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
FOXR1Q6PIV2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
FOXR1Q6PIV2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC28.44■■■□□ 2.14
FOXR1Q6PIV2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
FOXR1Q6PIV2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
FOXR1Q6PIV2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
FOXR1Q6PIV2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
FOXR1Q6PIV2 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
FOXR1Q6PIV2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
FOXR1Q6PIV2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
FOXR1Q6PIV2 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
FOXR1Q6PIV2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
FOXR1Q6PIV2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
FOXR1Q6PIV2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
FOXR1Q6PIV2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
FOXR1Q6PIV2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
FOXR1Q6PIV2 DYNLL1-208ENST00000550178 581 ntBASIC28.37■■■□□ 2.13
FOXR1Q6PIV2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
FOXR1Q6PIV2 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
FOXR1Q6PIV2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
FOXR1Q6PIV2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC28.34■■■□□ 2.13
FOXR1Q6PIV2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
FOXR1Q6PIV2 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC28.34■■■□□ 2.13
FOXR1Q6PIV2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
FOXR1Q6PIV2 AC145285.7-201ENST00000614819 1539 ntBASIC28.33■■■□□ 2.13
FOXR1Q6PIV2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
FOXR1Q6PIV2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
FOXR1Q6PIV2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.28■■■□□ 2.12
FOXR1Q6PIV2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
FOXR1Q6PIV2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
FOXR1Q6PIV2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
FOXR1Q6PIV2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
FOXR1Q6PIV2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
FOXR1Q6PIV2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
FOXR1Q6PIV2 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
FOXR1Q6PIV2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC28.23■■■□□ 2.11
FOXR1Q6PIV2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
FOXR1Q6PIV2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
FOXR1Q6PIV2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.18■■■□□ 2.1
FOXR1Q6PIV2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
FOXR1Q6PIV2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
FOXR1Q6PIV2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
FOXR1Q6PIV2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
FOXR1Q6PIV2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
FOXR1Q6PIV2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
FOXR1Q6PIV2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
FOXR1Q6PIV2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
FOXR1Q6PIV2 AL031258.1-201ENST00000623562 325 ntBASIC28.1■■■□□ 2.09
FOXR1Q6PIV2 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
FOXR1Q6PIV2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
FOXR1Q6PIV2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28.09■■■□□ 2.09
FOXR1Q6PIV2 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
FOXR1Q6PIV2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
FOXR1Q6PIV2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
FOXR1Q6PIV2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
FOXR1Q6PIV2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
FOXR1Q6PIV2 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
FOXR1Q6PIV2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
FOXR1Q6PIV2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
FOXR1Q6PIV2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
FOXR1Q6PIV2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.04■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms