Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 MIR3665-201ENST00000578708 105 ntBASIC29.89■■■□□ 2.38
PTCRAQ6ISU1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.88■■■□□ 2.37
PTCRAQ6ISU1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC29.86■■■□□ 2.37
PTCRAQ6ISU1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
PTCRAQ6ISU1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC29.85■■■□□ 2.37
PTCRAQ6ISU1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
PTCRAQ6ISU1 MVK-208ENST00000539696 608 ntTSL 5 BASIC29.84■■■□□ 2.37
PTCRAQ6ISU1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
PTCRAQ6ISU1 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
PTCRAQ6ISU1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
PTCRAQ6ISU1 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
PTCRAQ6ISU1 AL133380.1-201ENST00000506013 324 ntBASIC29.77■■■□□ 2.36
PTCRAQ6ISU1 AC087741.3-201ENST00000624270 1347 ntBASIC29.76■■■□□ 2.36
PTCRAQ6ISU1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
PTCRAQ6ISU1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.75■■■□□ 2.35
PTCRAQ6ISU1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.75■■■□□ 2.35
PTCRAQ6ISU1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.74■■■□□ 2.35
PTCRAQ6ISU1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
PTCRAQ6ISU1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
PTCRAQ6ISU1 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.72■■■□□ 2.35
PTCRAQ6ISU1 AC145285.7-201ENST00000614819 1539 ntBASIC29.71■■■□□ 2.35
PTCRAQ6ISU1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
PTCRAQ6ISU1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
PTCRAQ6ISU1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.7■■■□□ 2.35
PTCRAQ6ISU1 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC29.67■■■□□ 2.34
PTCRAQ6ISU1 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC29.67■■■□□ 2.34
PTCRAQ6ISU1 AC044849.2-201ENST00000606596 710 ntBASIC29.66■■■□□ 2.34
PTCRAQ6ISU1 DUX4L28-201ENST00000623687 678 ntBASIC29.66■■■□□ 2.34
PTCRAQ6ISU1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.63■■■□□ 2.33
PTCRAQ6ISU1 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
PTCRAQ6ISU1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.62■■■□□ 2.33
PTCRAQ6ISU1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
PTCRAQ6ISU1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
PTCRAQ6ISU1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.6■■■□□ 2.33
PTCRAQ6ISU1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
PTCRAQ6ISU1 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.6■■■□□ 2.33
PTCRAQ6ISU1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.59■■■□□ 2.33
PTCRAQ6ISU1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.55■■■□□ 2.32
PTCRAQ6ISU1 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.55■■■□□ 2.32
PTCRAQ6ISU1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.54■■■□□ 2.32
PTCRAQ6ISU1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.53■■■□□ 2.32
PTCRAQ6ISU1 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.52■■■□□ 2.32
PTCRAQ6ISU1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
PTCRAQ6ISU1 MIR762-201ENST00000390236 83 ntBASIC29.49■■■□□ 2.31
PTCRAQ6ISU1 ZNRF2P2-203ENST00000454624 420 ntBASIC29.49■■■□□ 2.31
PTCRAQ6ISU1 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.48■■■□□ 2.31
PTCRAQ6ISU1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
PTCRAQ6ISU1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.48■■■□□ 2.31
PTCRAQ6ISU1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.48■■■□□ 2.31
PTCRAQ6ISU1 AC005559.1-201ENST00000589661 871 ntBASIC29.48■■■□□ 2.31
PTCRAQ6ISU1 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
PTCRAQ6ISU1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.46■■■□□ 2.31
PTCRAQ6ISU1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC29.46■■■□□ 2.31
PTCRAQ6ISU1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.46■■■□□ 2.31
PTCRAQ6ISU1 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
PTCRAQ6ISU1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.44■■■□□ 2.3
PTCRAQ6ISU1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
PTCRAQ6ISU1 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
PTCRAQ6ISU1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC29.41■■■□□ 2.3
PTCRAQ6ISU1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PTCRAQ6ISU1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PTCRAQ6ISU1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.38■■■□□ 2.29
PTCRAQ6ISU1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
PTCRAQ6ISU1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.37■■■□□ 2.29
PTCRAQ6ISU1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.36■■■□□ 2.29
PTCRAQ6ISU1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PTCRAQ6ISU1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
PTCRAQ6ISU1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PTCRAQ6ISU1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
PTCRAQ6ISU1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
PTCRAQ6ISU1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PTCRAQ6ISU1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.31■■■□□ 2.28
PTCRAQ6ISU1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.3■■■□□ 2.28
PTCRAQ6ISU1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
PTCRAQ6ISU1 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PTCRAQ6ISU1 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC29.29■■■□□ 2.28
PTCRAQ6ISU1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
PTCRAQ6ISU1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.26■■■□□ 2.27
PTCRAQ6ISU1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.25■■■□□ 2.27
PTCRAQ6ISU1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.24■■■□□ 2.27
PTCRAQ6ISU1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
PTCRAQ6ISU1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.22■■■□□ 2.27
PTCRAQ6ISU1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.22■■■□□ 2.27
PTCRAQ6ISU1 MIR4449-201ENST00000578365 66 ntBASIC29.21■■■□□ 2.27
PTCRAQ6ISU1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
PTCRAQ6ISU1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
PTCRAQ6ISU1 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
PTCRAQ6ISU1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC29.16■■■□□ 2.26
PTCRAQ6ISU1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.16■■■□□ 2.26
PTCRAQ6ISU1 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
PTCRAQ6ISU1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.15■■■□□ 2.26
PTCRAQ6ISU1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.13■■■□□ 2.25
PTCRAQ6ISU1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
PTCRAQ6ISU1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
PTCRAQ6ISU1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.1■■■□□ 2.25
PTCRAQ6ISU1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.1■■■□□ 2.25
PTCRAQ6ISU1 MIR639-201ENST00000384974 98 ntBASIC29.08■■■□□ 2.25
PTCRAQ6ISU1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
PTCRAQ6ISU1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
PTCRAQ6ISU1 DUX4L29-201ENST00000425409 679 ntBASIC29.04■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms