Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHRFAM7AQ494W8 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
CHRFAM7AQ494W8 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHRFAM7AQ494W8 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHRFAM7AQ494W8 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHRFAM7AQ494W8 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
CHRFAM7AQ494W8 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC24■■□□□ 1.43
CHRFAM7AQ494W8 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHRFAM7AQ494W8 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHRFAM7AQ494W8 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC23.98■■□□□ 1.43
CHRFAM7AQ494W8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC23.97■■□□□ 1.43
CHRFAM7AQ494W8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CHRFAM7AQ494W8 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHRFAM7AQ494W8 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CHRFAM7AQ494W8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CHRFAM7AQ494W8 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHRFAM7AQ494W8 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHRFAM7AQ494W8 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
CHRFAM7AQ494W8 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
CHRFAM7AQ494W8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
CHRFAM7AQ494W8 AC097358.2-201ENST00000607541 1159 ntBASIC23.92■■□□□ 1.42
CHRFAM7AQ494W8 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHRFAM7AQ494W8 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC23.92■■□□□ 1.42
CHRFAM7AQ494W8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CHRFAM7AQ494W8 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
CHRFAM7AQ494W8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
CHRFAM7AQ494W8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.88■■□□□ 1.41
CHRFAM7AQ494W8 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CHRFAM7AQ494W8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.86■■□□□ 1.41
CHRFAM7AQ494W8 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHRFAM7AQ494W8 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CHRFAM7AQ494W8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.82■■□□□ 1.4
CHRFAM7AQ494W8 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHRFAM7AQ494W8 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CHRFAM7AQ494W8 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHRFAM7AQ494W8 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CHRFAM7AQ494W8 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHRFAM7AQ494W8 SETD8P1-201ENST00000623146 1180 ntBASIC23.8■■□□□ 1.4
CHRFAM7AQ494W8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHRFAM7AQ494W8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHRFAM7AQ494W8 RPS2P35-201ENST00000443417 897 ntBASIC23.79■■□□□ 1.4
CHRFAM7AQ494W8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHRFAM7AQ494W8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.79■■□□□ 1.4
CHRFAM7AQ494W8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHRFAM7AQ494W8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.78■■□□□ 1.4
CHRFAM7AQ494W8 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHRFAM7AQ494W8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHRFAM7AQ494W8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHRFAM7AQ494W8 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHRFAM7AQ494W8 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHRFAM7AQ494W8 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CHRFAM7AQ494W8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHRFAM7AQ494W8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHRFAM7AQ494W8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHRFAM7AQ494W8 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHRFAM7AQ494W8 AC136428.2-201ENST00000563187 214 ntBASIC23.74■■□□□ 1.39
CHRFAM7AQ494W8 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHRFAM7AQ494W8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHRFAM7AQ494W8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC23.71■■□□□ 1.39
CHRFAM7AQ494W8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHRFAM7AQ494W8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHRFAM7AQ494W8 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CHRFAM7AQ494W8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC23.69■■□□□ 1.38
CHRFAM7AQ494W8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.69■■□□□ 1.38
CHRFAM7AQ494W8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.69■■□□□ 1.38
CHRFAM7AQ494W8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.68■■□□□ 1.38
CHRFAM7AQ494W8 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHRFAM7AQ494W8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CHRFAM7AQ494W8 SUZ12P1-203ENST00000578195 985 ntBASIC23.68■■□□□ 1.38
CHRFAM7AQ494W8 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHRFAM7AQ494W8 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC23.67■■□□□ 1.38
CHRFAM7AQ494W8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CHRFAM7AQ494W8 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHRFAM7AQ494W8 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHRFAM7AQ494W8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
CHRFAM7AQ494W8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHRFAM7AQ494W8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.62■■□□□ 1.37
CHRFAM7AQ494W8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.61■■□□□ 1.37
CHRFAM7AQ494W8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHRFAM7AQ494W8 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHRFAM7AQ494W8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.59■■□□□ 1.37
CHRFAM7AQ494W8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CHRFAM7AQ494W8 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC23.58■■□□□ 1.37
CHRFAM7AQ494W8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
CHRFAM7AQ494W8 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CHRFAM7AQ494W8 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC23.58■■□□□ 1.36
CHRFAM7AQ494W8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CHRFAM7AQ494W8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CHRFAM7AQ494W8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CHRFAM7AQ494W8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC23.56■■□□□ 1.36
CHRFAM7AQ494W8 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
CHRFAM7AQ494W8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
CHRFAM7AQ494W8 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC23.55■■□□□ 1.36
CHRFAM7AQ494W8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.55■■□□□ 1.36
CHRFAM7AQ494W8 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC23.54■■□□□ 1.36
CHRFAM7AQ494W8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHRFAM7AQ494W8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHRFAM7AQ494W8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHRFAM7AQ494W8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CHRFAM7AQ494W8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms