Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AL133380.1-201ENST00000506013 324 ntBASIC39.44■■■■□ 3.9
COL16A1Q07092 MIR3665-201ENST00000578708 105 ntBASIC39.44■■■■□ 3.9
COL16A1Q07092 DUX4L28-201ENST00000623687 678 ntBASIC39.41■■■■□ 3.9
COL16A1Q07092 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC39.41■■■■□ 3.9
COL16A1Q07092 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC39.4■■■■□ 3.9
COL16A1Q07092 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC39.4■■■■□ 3.9
COL16A1Q07092 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC39.36■■■■□ 3.89
COL16A1Q07092 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC39.36■■■■□ 3.89
COL16A1Q07092 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC39.35■■■■□ 3.89
COL16A1Q07092 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC39.34■■■■□ 3.89
COL16A1Q07092 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC39.34■■■■□ 3.89
COL16A1Q07092 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC39.33■■■■□ 3.89
COL16A1Q07092 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC39.32■■■■□ 3.89
COL16A1Q07092 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.89
COL16A1Q07092 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC39.32■■■■□ 3.88
COL16A1Q07092 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC39.31■■■■□ 3.88
COL16A1Q07092 AC044849.2-201ENST00000606596 710 ntBASIC39.29■■■■□ 3.88
COL16A1Q07092 EBPL-202ENST00000378268 680 ntTSL 3 BASIC39.29■■■■□ 3.88
COL16A1Q07092 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC39.27■■■■□ 3.88
COL16A1Q07092 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC39.26■■■■□ 3.88
COL16A1Q07092 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC39.26■■■■□ 3.88
COL16A1Q07092 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC39.26■■■■□ 3.88
COL16A1Q07092 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC39.25■■■■□ 3.87
COL16A1Q07092 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC39.24■■■■□ 3.87
COL16A1Q07092 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC39.24■■■■□ 3.87
COL16A1Q07092 MVK-208ENST00000539696 608 ntTSL 5 BASIC39.2■■■■□ 3.87
COL16A1Q07092 AC145285.7-201ENST00000614819 1539 ntBASIC39.19■■■■□ 3.86
COL16A1Q07092 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC39.14■■■■□ 3.86
COL16A1Q07092 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC39.14■■■■□ 3.86
COL16A1Q07092 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC39.13■■■■□ 3.85
COL16A1Q07092 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC39.1■■■■□ 3.85
COL16A1Q07092 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
COL16A1Q07092 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC39.09■■■■□ 3.85
COL16A1Q07092 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
COL16A1Q07092 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC39.07■■■■□ 3.84
COL16A1Q07092 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC39.03■■■■□ 3.84
COL16A1Q07092 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC39.03■■■■□ 3.84
COL16A1Q07092 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC39■■■■□ 3.83
COL16A1Q07092 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC39■■■■□ 3.83
COL16A1Q07092 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC39■■■■□ 3.83
COL16A1Q07092 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC38.99■■■■□ 3.83
COL16A1Q07092 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC38.98■■■■□ 3.83
COL16A1Q07092 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
COL16A1Q07092 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC38.97■■■■□ 3.83
COL16A1Q07092 RPS2-202ENST00000526522 924 ntTSL 2 BASIC38.95■■■■□ 3.83
COL16A1Q07092 AC005559.1-201ENST00000589661 871 ntBASIC38.95■■■■□ 3.83
COL16A1Q07092 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC38.94■■■■□ 3.82
COL16A1Q07092 MIR762-201ENST00000390236 83 ntBASIC38.92■■■■□ 3.82
COL16A1Q07092 ZNRF2P2-203ENST00000454624 420 ntBASIC38.92■■■■□ 3.82
COL16A1Q07092 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
COL16A1Q07092 CHML-205ENST00000638160 705 ntTSL 3 BASIC38.92■■■■□ 3.82
COL16A1Q07092 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC38.91■■■■□ 3.82
COL16A1Q07092 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC38.91■■■■□ 3.82
COL16A1Q07092 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC38.89■■■■□ 3.82
COL16A1Q07092 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC38.87■■■■□ 3.81
COL16A1Q07092 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC38.87■■■■□ 3.81
COL16A1Q07092 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
COL16A1Q07092 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC38.86■■■■□ 3.81
COL16A1Q07092 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC38.85■■■■□ 3.81
COL16A1Q07092 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC38.85■■■■□ 3.81
COL16A1Q07092 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC38.84■■■■□ 3.81
COL16A1Q07092 MIR4449-201ENST00000578365 66 ntBASIC38.82■■■■□ 3.81
COL16A1Q07092 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC38.81■■■■□ 3.8
COL16A1Q07092 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
COL16A1Q07092 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC38.79■■■■□ 3.8
COL16A1Q07092 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC38.79■■■■□ 3.8
COL16A1Q07092 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC38.79■■■■□ 3.8
COL16A1Q07092 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC38.78■■■■□ 3.8
COL16A1Q07092 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC38.78■■■■□ 3.8
COL16A1Q07092 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC38.77■■■■□ 3.8
COL16A1Q07092 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC38.75■■■■□ 3.79
COL16A1Q07092 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC38.74■■■■□ 3.79
COL16A1Q07092 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC38.73■■■■□ 3.79
COL16A1Q07092 HGH1-207ENST00000628266 258 ntTSL 5 BASIC38.73■■■■□ 3.79
COL16A1Q07092 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC38.72■■■■□ 3.79
COL16A1Q07092 BOD1-206ENST00000480951 814 ntTSL 2 BASIC38.72■■■■□ 3.79
COL16A1Q07092 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC38.67■■■■□ 3.78
COL16A1Q07092 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC38.67■■■■□ 3.78
COL16A1Q07092 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC38.65■■■■□ 3.78
COL16A1Q07092 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC38.65■■■■□ 3.78
COL16A1Q07092 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC38.65■■■■□ 3.78
COL16A1Q07092 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC38.62■■■■□ 3.77
COL16A1Q07092 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC38.61■■■■□ 3.77
COL16A1Q07092 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
COL16A1Q07092 ILK-212ENST00000532063 1617 ntTSL 2 BASIC38.59■■■■□ 3.77
COL16A1Q07092 HSD17B1P1-201ENST00000590052 955 ntBASIC38.57■■■■□ 3.77
COL16A1Q07092 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC38.56■■■■□ 3.76
COL16A1Q07092 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC38.55■■■■□ 3.76
COL16A1Q07092 DENR-202ENST00000455982 1052 ntTSL 5 BASIC38.55■■■■□ 3.76
COL16A1Q07092 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC38.53■■■■□ 3.76
COL16A1Q07092 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC38.52■■■■□ 3.76
COL16A1Q07092 MIR639-201ENST00000384974 98 ntBASIC38.52■■■■□ 3.76
COL16A1Q07092 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC38.52■■■■□ 3.76
COL16A1Q07092 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC38.51■■■■□ 3.76
COL16A1Q07092 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC38.51■■■■□ 3.76
COL16A1Q07092 MACF1-219ENST00000484793 834 ntTSL 2 BASIC38.5■■■■□ 3.75
COL16A1Q07092 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC38.49■■■■□ 3.75
COL16A1Q07092 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC38.47■■■■□ 3.75
COL16A1Q07092 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC38.44■■■■□ 3.74
COL16A1Q07092 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC38.4■■■■□ 3.74
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms