Protein–RNA interactions for Protein: P62280

RPS11, 40S ribosomal protein S11, humanhuman

Known RBP eCLIP

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS11P62280 EDA-211ENST00000530321 339 ntTSL 22.6□□□□□ -1.991e-323■■■□□ 17.3
RPS11P62280 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.673e-10■■■□□ 17.3
RPS11P62280 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.363e-10■■■□□ 17.3
RPS11P62280 SPN-205ENST00000563039 1853 ntTSL 517.1■□□□□ 0.333e-10■■■□□ 17.3
RPS11P62280 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.343e-10■■■□□ 17.3
RPS11P62280 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.252e-14■■■□□ 16.9
RPS11P62280 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC9.42□□□□□ -0.91e-323■■■□□ 16.3
RPS11P62280 NR2F2-AS1-201ENST00000502125 1930 ntTSL 2 BASIC8.46□□□□□ -1.051e-323■■■□□ 16.3
RPS11P62280 NR2F2-AS1-203ENST00000558929 574 ntTSL 5 BASIC7.95□□□□□ -1.141e-323■■■□□ 16.3
RPS11P62280 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.54□□□□□ -1.361e-323■■■□□ 16.3
RPS11P62280 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.78□□□□□ -1.961e-323■■■□□ 16.3
RPS11P62280 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.54e-25■■■□□ 16.1
RPS11P62280 COL22A1-203ENST00000435777 4355 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.624e-25■■■□□ 16.1
RPS11P62280 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.864e-6■■■□□ 16
RPS11P62280 SDF4-205ENST00000465727 2095 ntTSL 218.24■□□□□ 0.514e-6■■■□□ 16
RPS11P62280 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.484e-6■■■□□ 16
RPS11P62280 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.174e-6■■■□□ 16
RPS11P62280 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.064e-6■■■□□ 16
RPS11P62280 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.6□□□□□ -0.074e-11■■■□□ 16
RPS11P62280 SDF4-207ENST00000494748 3516 ntTSL 214.25□□□□□ -0.134e-6■■■□□ 16
RPS11P62280 PRPF19-202ENST00000535326 779 ntTSL 511.51□□□□□ -0.574e-6■■■□□ 16
RPS11P62280 HSPD1-201ENST00000345042 2299 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.684e-6■■■□□ 16
RPS11P62280 SDF4-203ENST00000403997 728 ntTSL 310.69□□□□□ -0.74e-6■■■□□ 16
RPS11P62280 EIF4A2-215ENST00000467585 570 ntTSL 210.68□□□□□ -0.74e-6■■■□□ 16
RPS11P62280 EIF4A2-208ENST00000445596 600 ntTSL 29.17□□□□□ -0.944e-6■■■□□ 16
RPS11P62280 EIF4A2-201ENST00000323963 1919 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.974e-6■■■□□ 16
RPS11P62280 EIF4A2-227ENST00000498746 579 ntTSL 28.68□□□□□ -1.024e-6■■■□□ 16
RPS11P62280 XIST-211ENST00000635841 1734 ntTSL 5 BASIC7.69□□□□□ -1.184e-6■■■□□ 16
RPS11P62280 XIST-206ENST00000434839 2865 ntTSL 5 BASIC7.26□□□□□ -1.254e-6■■■□□ 16
RPS11P62280 HSPD1-214ENST00000491249 860 ntTSL 26.71□□□□□ -1.344e-6■■■□□ 16
RPS11P62280 EIF4A2-203ENST00000426808 1751 ntTSL 1 (best)6.62□□□□□ -1.354e-6■■■□□ 16
RPS11P62280 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.474e-6■■■□□ 16
RPS11P62280 EIF4A2-207ENST00000443963 1729 ntTSL 1 (best)5.87□□□□□ -1.474e-6■■■□□ 16
RPS11P62280 EIF4A2-202ENST00000425053 1977 ntTSL 55.49□□□□□ -1.534e-6■■■□□ 16
RPS11P62280 EIF4A2-211ENST00000465222 676 ntTSL 25.31□□□□□ -1.564e-6■■■□□ 16
RPS11P62280 PRPF19-205ENST00000540473 169 ntTSL 55.21□□□□□ -1.584e-6■■■□□ 16
RPS11P62280 EIF4A2-221ENST00000491473 579 ntTSL 24.74□□□□□ -1.654e-6■■■□□ 16
RPS11P62280 EIF4A2-212ENST00000465267 1054 ntTSL 24.74□□□□□ -1.654e-6■■■□□ 16
RPS11P62280 EIF4A2-204ENST00000429589 1005 ntTSL 54.32□□□□□ -1.724e-6■■■□□ 16
RPS11P62280 EIF4A2-224ENST00000495049 576 ntTSL 24.32□□□□□ -1.724e-6■■■□□ 16
RPS11P62280 EIF4A2-210ENST00000465032 578 ntTSL 24.32□□□□□ -1.724e-6■■■□□ 16
RPS11P62280 EIF4A2-218ENST00000475653 909 ntTSL 24.25□□□□□ -1.734e-6■■■□□ 16
RPS11P62280 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.24□□□□□ -1.734e-6■■■□□ 16
RPS11P62280 EIF4A2-219ENST00000485101 5327 ntTSL 53.92□□□□□ -1.784e-6■■■□□ 16
RPS11P62280 EIF4A2-220ENST00000486805 590 ntTSL 22.37□□□□□ -2.034e-6■■■□□ 16
RPS11P62280 NR2F2-AS1-202ENST00000557863 515 ntTSL 313.28□□□□□ -0.281e-323■■■□□ 15.9
RPS11P62280 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.4□□□□□ -0.11e-6■■■□□ 15.8
RPS11P62280 AARS-201ENST00000261772 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.661e-7■■■□□ 15.6
RPS11P62280 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.785e-9■■■□□ 15.4
RPS11P62280 SNRNP70-204ENST00000595231 1673 ntTSL 1 (best)19.15■□□□□ 0.665e-9■■■□□ 15.4
RPS11P62280 SNRNP70-209ENST00000601065 1757 ntTSL 319.14■□□□□ 0.665e-9■■■□□ 15.4
RPS11P62280 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.09■□□□□ 0.655e-9■■■□□ 15.4
RPS11P62280 SNRNP70-202ENST00000401730 3144 ntTSL 215.59■□□□□ 0.095e-9■■■□□ 15.4
RPS11P62280 SNRNP70-203ENST00000544278 3221 ntTSL 1 (best)14.36□□□□□ -0.115e-9■■■□□ 15.4
RPS11P62280 AC004687.1-201ENST00000579003 1625 ntBASIC19.06■□□□□ 0.641e-7■■■□□ 15.3
RPS11P62280 AHNAK-208ENST00000533365 584 ntAPPRIS ALT2 TSL 516.48■□□□□ 0.231e-6■■■□□ 15
RPS11P62280 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.321e-6■■■□□ 15
RPS11P62280 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.641e-6■■■□□ 15
RPS11P62280 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.691e-6■■■□□ 15
RPS11P62280 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.375e-14■■□□□ 14.4
RPS11P62280 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.865e-14■■□□□ 14.4
RPS11P62280 RNA5SP259-201ENST00000365541 109 ntBASIC0.8□□□□□ -2.285e-14■■□□□ 14.4
RPS11P62280 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.426e-7■■□□□ 14.4
RPS11P62280 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.346e-7■■□□□ 14.4
RPS11P62280 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.336e-7■■□□□ 14.4
RPS11P62280 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.246e-7■■□□□ 14.4
RPS11P62280 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.196e-7■■□□□ 14.4
RPS11P62280 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.596e-7■■□□□ 14.4
RPS11P62280 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.566e-7■■□□□ 14.4
RPS11P62280 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.56e-7■■□□□ 14.4
RPS11P62280 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.586e-7■■□□□ 14.4
RPS11P62280 CROCCP2-207ENST00000640476 1750 ntTSL 517.4■□□□□ 0.387e-6■■□□□ 14.2
RPS11P62280 CROCCP2-206ENST00000639594 2175 ntTSL 1 (best)17.28■□□□□ 0.367e-6■■□□□ 14.2
RPS11P62280 CROCCP2-204ENST00000639456 2575 ntTSL 516.43■□□□□ 0.227e-6■■□□□ 14.2
RPS11P62280 CROCCP2-202ENST00000412962 2773 ntBASIC15.84■□□□□ 0.137e-6■■□□□ 14.2
RPS11P62280 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.32■□□□□ 0.047e-6■■□□□ 14.2
RPS11P62280 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.57e-8■■□□□ 13.7
RPS11P62280 SRSF4-206ENST00000605204 1399 ntTSL 1 (best)15.72■□□□□ 0.117e-8■■□□□ 13.7
RPS11P62280 SRSF4-202ENST00000466448 1264 ntAPPRIS ALT2 TSL 314.55□□□□□ -0.087e-8■■□□□ 13.7
RPS11P62280 FLVCR2-201ENST00000238667 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.78e-22■■□□□ 13.7
RPS11P62280 FLVCR2-205ENST00000554496 441 ntTSL 310.28□□□□□ -0.768e-22■■□□□ 13.7
RPS11P62280 FLVCR2-209ENST00000555385 218 ntTSL 47.6□□□□□ -1.198e-22■■□□□ 13.7
RPS11P62280 RNA5SP387-201ENST00000364226 106 ntBASIC1.73□□□□□ -2.138e-22■■□□□ 13.7
RPS11P62280 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC11.84□□□□□ -0.512e-19■■□□□ 13.4
RPS11P62280 SNHG25-201ENST00000580828 106 ntTSL 29.8□□□□□ -0.842e-19■■□□□ 13.4
RPS11P62280 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.643e-6■■□□□ 13.2
RPS11P62280 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.7■□□□□ 0.423e-6■■□□□ 13.2
RPS11P62280 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.92■□□□□ 0.33e-6■■□□□ 13.2
RPS11P62280 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.26■□□□□ 0.193e-6■■□□□ 13.2
RPS11P62280 FLNA-216ENST00000490936 5374 ntTSL 1 (best)13.75□□□□□ -0.213e-6■■□□□ 13.2
RPS11P62280 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.213e-6■■□□□ 13.2
RPS11P62280 FLNA-213ENST00000466325 828 ntTSL 213.32□□□□□ -0.283e-6■■□□□ 13.2
RPS11P62280 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.21□□□□□ -0.293e-6■■□□□ 13.2
RPS11P62280 FLNA-209ENST00000444578 843 ntTSL 313.08□□□□□ -0.323e-6■■□□□ 13.2
RPS11P62280 FLNA-205ENST00000415241 704 ntTSL 512.51□□□□□ -0.413e-6■■□□□ 13.2
RPS11P62280 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC11.53□□□□□ -0.563e-6■■□□□ 13.2
RPS11P62280 SERP1-203ENST00000479209 3934 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.623e-6■■□□□ 13.2
RPS11P62280 RNA5SP141-201ENST00000364543 120 ntBASIC7.52□□□□□ -1.212e-68■■□□□ 13.2
RPS11P62280 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.351e-323■■□□□ 12.9
RPS11P62280 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.451e-323■■□□□ 12.9
Retrieved 100 of 539 protein–RNA pairs in 19.2 ms