RNA–Protein interactions for RNA: ENST00000540473.5

PRPF19-205, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 5

Gene PRPF19, Length 169 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-205ENST00000540473 NISCHQ9Y2I1 1504 aa16.75■□□□□ 0.27
PRPF19-205ENST00000540473 ABCC9O60706 1549 aa15.02■□□□□ -0
PRPF19-205ENST00000540473 CCDC180Q9P1Z9 1646 aa14.95□□□□□ -0.02
PRPF19-205ENST00000540473 DNAJC5BQ9UF47 199 aa14.22□□□□□ -0.13
PRPF19-205ENST00000540473 RB1CC1Q8TDY2 1594 aa14.2□□□□□ -0.14
PRPF19-205ENST00000540473 DCAF8L2P0C7V8 631 aa14.13□□□□□ -0.15
PRPF19-205ENST00000540473 NACADO15069 1562 aa14.11□□□□□ -0.15
PRPF19-205ENST00000540473 UNC13AQ9UPW8 1703 aa14.09□□□□□ -0.15
PRPF19-205ENST00000540473 PABPN1Q86U42 306 aaKnown RBP eCLIP14.03□□□□□ -0.16
PRPF19-205ENST00000540473 BICRAQ9NZM4 1560 aa13.95□□□□□ -0.18
PRPF19-205ENST00000540473 MYO15BQ96JP2 1530 aa13.9□□□□□ -0.18
PRPF19-205ENST00000540473 ZCCHC6Q5VYS8 1495 aaKnown RBP13.87□□□□□ -0.19
PRPF19-205ENST00000540473 DCAF1Q9Y4B6 1507 aa13.76□□□□□ -0.21
PRPF19-205ENST00000540473 SCRIBQ14160 1630 aa13.72□□□□□ -0.21
PRPF19-205ENST00000540473 CC2D2AQ9P2K1 1620 aa13.57□□□□□ -0.24
PRPF19-205ENST00000540473 EIF4G1Q04637 1599 aaKnown RBP13.52□□□□□ -0.25
PRPF19-205ENST00000540473 SHROOM4Q9ULL8 1493 aa13.5□□□□□ -0.25
PRPF19-205ENST00000540473 CECR2Q9BXF3 1484 aa13.48□□□□□ -0.25
PRPF19-205ENST00000540473 NCAPD3P42695 1498 aa13.07□□□□□ -0.32
PRPF19-205ENST00000540473 SMARCA4P51532 1647 aa13.06□□□□□ -0.32
PRPF19-205ENST00000540473 ATAD2BQ9ULI0 1458 aa13.06□□□□□ -0.32
PRPF19-205ENST00000540473 NESP48681 1621 aa12.98□□□□□ -0.33
PRPF19-205ENST00000540473 MROH2BQ7Z745 1585 aa12.98□□□□□ -0.33
PRPF19-205ENST00000540473 SMARCA2P51531 1590 aa12.94□□□□□ -0.34
PRPF19-205ENST00000540473 HMGXB3Q12766 1538 aa12.93□□□□□ -0.34
PRPF19-205ENST00000540473 BAZ1AQ9NRL2 1556 aaPredicted RBP12.93□□□□□ -0.34
PRPF19-205ENST00000540473 PEG3Q9GZU2 1588 aa12.9□□□□□ -0.34
PRPF19-205ENST00000540473 BAZ1BQ9UIG0 1483 aaKnown RBP12.88□□□□□ -0.35
PRPF19-205ENST00000540473 DNAJC5Q9H3Z4 198 aa12.87□□□□□ -0.35
PRPF19-205ENST00000540473 ERCC6Q03468 1493 aa12.85□□□□□ -0.35
PRPF19-205ENST00000540473 WIZO95785 1651 aa12.84□□□□□ -0.35
PRPF19-205ENST00000540473 CUX2O14529 1486 aa12.8□□□□□ -0.36
PRPF19-205ENST00000540473 KIF21AQ7Z4S6 1674 aa12.79□□□□□ -0.36
PRPF19-205ENST00000540473 THOC2Q8NI27 1593 aaKnown RBP12.77□□□□□ -0.37
PRPF19-205ENST00000540473 LAMC3Q9Y6N6 1575 aa12.73□□□□□ -0.37
PRPF19-205ENST00000540473 RSF1Q96T23 1441 aaPredicted RBP12.68□□□□□ -0.38
PRPF19-205ENST00000540473 CADPSQ9ULU8 1353 aa12.67□□□□□ -0.38
PRPF19-205ENST00000540473 PDS5BQ9NTI5 1447 aa12.62□□□□□ -0.39
PRPF19-205ENST00000540473 TOP2AP11388 1531 aaKnown RBP12.57□□□□□ -0.4
PRPF19-205ENST00000540473 MRC2Q9UBG0 1479 aa12.56□□□□□ -0.4
PRPF19-205ENST00000540473 WDR62O43379 1518 aa12.56□□□□□ -0.4
PRPF19-205ENST00000540473 CFTRP13569 1480 aa12.54□□□□□ -0.4
PRPF19-205ENST00000540473 FANCD2Q9BXW9 1451 aa12.53□□□□□ -0.4
PRPF19-205ENST00000540473 CEP164Q9UPV0 1460 aa12.5□□□□□ -0.41
PRPF19-205ENST00000540473 URB2Q14146 1524 aaKnown RBP12.49□□□□□ -0.41
PRPF19-205ENST00000540473 CCDC88BA6NC98 1476 aa12.49□□□□□ -0.41
PRPF19-205ENST00000540473 PRDM2Q13029 1718 aa12.44□□□□□ -0.42
PRPF19-205ENST00000540473 ZNF608Q9ULD9 1512 aaPredicted RBP12.37□□□□□ -0.43
PRPF19-205ENST00000540473 TOPBP1Q92547 1522 aa12.32□□□□□ -0.44
PRPF19-205ENST00000540473 TRIM41Q8WV44 630 aa12.31□□□□□ -0.44
PRPF19-205ENST00000540473 OSCARQ8IYS5 282 aa12.26□□□□□ -0.45
PRPF19-205ENST00000540473 IFT140Q96RY7 1462 aa12.25□□□□□ -0.45
PRPF19-205ENST00000540473 DNMBPQ6XZF7 1577 aa12.25□□□□□ -0.45
PRPF19-205ENST00000540473 TARBP1Q13395 1621 aaKnown RBP12.25□□□□□ -0.45
PRPF19-205ENST00000540473 AQRO60306 1485 aaKnown RBP eCLIP12.23□□□□□ -0.452e-9■■■■□ 22.2
PRPF19-205ENST00000540473 EIF4G3O43432 1585 aaKnown RBP12.22□□□□□ -0.45
PRPF19-205ENST00000540473 RAD54L2Q9Y4B4 1467 aa12.21□□□□□ -0.45
PRPF19-205ENST00000540473 POLA1P09884 1462 aaPredicted RBP12.2□□□□□ -0.46
PRPF19-205ENST00000540473 CHD1O14646 1710 aa12.19□□□□□ -0.46
PRPF19-205ENST00000540473 RIMBP3CA6NJZ7 1639 aa12.19□□□□□ -0.46
PRPF19-205ENST00000540473 RIMBP3BA6NNM3 1639 aa12.19□□□□□ -0.46
PRPF19-205ENST00000540473 RIMBP3Q9UFD9 1639 aa12.19□□□□□ -0.46
PRPF19-205ENST00000540473 ABCC8Q09428 1581 aa12.17□□□□□ -0.46
PRPF19-205ENST00000540473 CUX1P39880 1505 aa12.16□□□□□ -0.46
PRPF19-205ENST00000540473 SUPT5HO00267 1087 aaKnown RBP12.15□□□□□ -0.46
PRPF19-205ENST00000540473 TDRD9Q8NDG6 1382 aaKnown RBP12.15□□□□□ -0.46
PRPF19-205ENST00000540473 FGD5Q6ZNL6 1462 aa12.13□□□□□ -0.47
PRPF19-205ENST00000540473 SOGA1O94964 1423 aa12.12□□□□□ -0.47
PRPF19-205ENST00000540473 ARHGEF11O15085 1522 aa12.11□□□□□ -0.47
PRPF19-205ENST00000540473 WDR97A6NE52 1622 aa12.08□□□□□ -0.48
PRPF19-205ENST00000540473 FBLN2P98095 1184 aa12.07□□□□□ -0.48
PRPF19-205ENST00000540473 SNAPC4Q5SXM2 1469 aa12.05□□□□□ -0.48
PRPF19-205ENST00000540473 CYB5RLQ6IPT4 315 aa12.04□□□□□ -0.48
PRPF19-205ENST00000540473 ARAP1Q96P48 1450 aa12.02□□□□□ -0.48
PRPF19-205ENST00000540473 PBRM1Q86U86 1689 aa12□□□□□ -0.49
PRPF19-205ENST00000540473 CLASP1Q7Z460 1538 aa12□□□□□ -0.49
PRPF19-205ENST00000540473 SYNJ1O43426 1573 aa11.98□□□□□ -0.49
PRPF19-205ENST00000540473 ABCA5Q8WWZ7 1642 aa11.97□□□□□ -0.49
PRPF19-205ENST00000540473 GRIN2BQ13224 1484 aa11.97□□□□□ -0.49
PRPF19-205ENST00000540473 ABCA10Q8WWZ4 1543 aa11.96□□□□□ -0.49
PRPF19-205ENST00000540473 GAPVD1Q14C86 1478 aa11.96□□□□□ -0.49
PRPF19-205ENST00000540473 MAGI1Q96QZ7 1491 aaPredicted RBP11.95□□□□□ -0.5
PRPF19-205ENST00000540473 CHMP7Q8WUX9 453 aaPredicted RBP11.95□□□□□ -0.5
PRPF19-205ENST00000540473 BIVM-ERCC5R4GMW8 1640 aa11.94□□□□□ -0.5
PRPF19-205ENST00000540473 SYNJ2O15056 1496 aa11.94□□□□□ -0.5
PRPF19-205ENST00000540473 TOP2BQ02880 1626 aa11.93□□□□□ -0.5
PRPF19-205ENST00000540473 ERCC6L2Q5T890 1561 aa11.92□□□□□ -0.5
PRPF19-205ENST00000540473 WRNQ14191 1432 aaPredicted RBP eCLIP11.9□□□□□ -0.5
PRPF19-205ENST00000540473 CEP170Q5SW79 1584 aa11.88□□□□□ -0.51
PRPF19-205ENST00000540473 ADAMTS12P58397 1594 aa11.87□□□□□ -0.51
PRPF19-205ENST00000540473 GRIN2AQ12879 1464 aa11.85□□□□□ -0.51
PRPF19-205ENST00000540473 TRHP20396 242 aaPredicted RBP11.83□□□□□ -0.52
PRPF19-205ENST00000540473 NUP160Q12769 1436 aa11.82□□□□□ -0.52
PRPF19-205ENST00000540473 SHROOM2Q13796 1616 aa11.79□□□□□ -0.52
PRPF19-205ENST00000540473 FHAD1B1AJZ9 1412 aa11.78□□□□□ -0.52
PRPF19-205ENST00000540473 ERICH3Q5RHP9 1530 aa11.77□□□□□ -0.52
PRPF19-205ENST00000540473 IGF1RP08069 1367 aa11.72□□□□□ -0.53
PRPF19-205ENST00000540473 JPH4Q96JJ6 628 aa11.71□□□□□ -0.53
PRPF19-205ENST00000540473 PRG4Q92954 1404 aaPredicted RBP11.7□□□□□ -0.54
PRPF19-205ENST00000540473 RUSC2Q8N2Y8 1516 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms