Protein–RNA interactions for Protein: P61006

RAB8A, Ras-related protein Rab-8A, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB8AP61006 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RAB8AP61006 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.52■■□□□ 1.84
RAB8AP61006 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
RAB8AP61006 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
RAB8AP61006 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
RAB8AP61006 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.49■■□□□ 1.83
RAB8AP61006 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RAB8AP61006 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RAB8AP61006 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
RAB8AP61006 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RAB8AP61006 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.44■■□□□ 1.82
RAB8AP61006 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.43■■□□□ 1.82
RAB8AP61006 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.43■■□□□ 1.82
RAB8AP61006 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.42■■□□□ 1.82
RAB8AP61006 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
RAB8AP61006 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.41■■□□□ 1.82
RAB8AP61006 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RAB8AP61006 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RAB8AP61006 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.39■■□□□ 1.82
RAB8AP61006 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RAB8AP61006 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.38■■□□□ 1.81
RAB8AP61006 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.38■■□□□ 1.81
RAB8AP61006 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RAB8AP61006 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.37■■□□□ 1.81
RAB8AP61006 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.37■■□□□ 1.81
RAB8AP61006 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RAB8AP61006 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.36■■□□□ 1.81
RAB8AP61006 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RAB8AP61006 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RAB8AP61006 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RAB8AP61006 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.33■■□□□ 1.81
RAB8AP61006 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.32■■□□□ 1.8
RAB8AP61006 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.31■■□□□ 1.8
RAB8AP61006 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RAB8AP61006 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RAB8AP61006 RARRES2P7-201ENST00000567349 469 ntBASIC26.27■■□□□ 1.8
RAB8AP61006 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RAB8AP61006 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.24■■□□□ 1.79
RAB8AP61006 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RAB8AP61006 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RAB8AP61006 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
RAB8AP61006 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.19■■□□□ 1.78
RAB8AP61006 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.18■■□□□ 1.78
RAB8AP61006 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
RAB8AP61006 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
RAB8AP61006 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.16■■□□□ 1.78
RAB8AP61006 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RAB8AP61006 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
RAB8AP61006 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.15■■□□□ 1.78
RAB8AP61006 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.14■■□□□ 1.78
RAB8AP61006 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
RAB8AP61006 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RAB8AP61006 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RAB8AP61006 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RAB8AP61006 SETD8P1-201ENST00000623146 1180 ntBASIC26.12■■□□□ 1.77
RAB8AP61006 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
RAB8AP61006 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RAB8AP61006 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RAB8AP61006 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RAB8AP61006 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.1■■□□□ 1.77
RAB8AP61006 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RAB8AP61006 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RAB8AP61006 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
RAB8AP61006 AC120057.4-201ENST00000624722 1615 ntBASIC26.07■■□□□ 1.76
RAB8AP61006 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
RAB8AP61006 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.06■■□□□ 1.76
RAB8AP61006 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.06■■□□□ 1.76
RAB8AP61006 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RAB8AP61006 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RAB8AP61006 AL133380.1-201ENST00000506013 324 ntBASIC26.05■■□□□ 1.76
RAB8AP61006 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RAB8AP61006 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
RAB8AP61006 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RAB8AP61006 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RAB8AP61006 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RAB8AP61006 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RAB8AP61006 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RAB8AP61006 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RAB8AP61006 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RAB8AP61006 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26■■□□□ 1.75
RAB8AP61006 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RAB8AP61006 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26■■□□□ 1.75
RAB8AP61006 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
RAB8AP61006 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RAB8AP61006 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RAB8AP61006 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RAB8AP61006 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RAB8AP61006 AC097358.2-201ENST00000607541 1159 ntBASIC25.96■■□□□ 1.75
RAB8AP61006 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.96■■□□□ 1.75
RAB8AP61006 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.75
RAB8AP61006 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.75
RAB8AP61006 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
RAB8AP61006 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
RAB8AP61006 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.93■■□□□ 1.74
RAB8AP61006 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.93■■□□□ 1.74
RAB8AP61006 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RAB8AP61006 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.92■■□□□ 1.74
RAB8AP61006 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.92■■□□□ 1.74
RAB8AP61006 AC136428.2-201ENST00000563187 214 ntBASIC25.92■■□□□ 1.74
RAB8AP61006 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms