Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
WNT3P56703 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
WNT3P56703 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
WNT3P56703 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
WNT3P56703 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
WNT3P56703 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
WNT3P56703 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.36■■□□□ 1.81
WNT3P56703 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.36■■□□□ 1.81
WNT3P56703 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.36■■□□□ 1.81
WNT3P56703 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
WNT3P56703 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
WNT3P56703 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC26.35■■□□□ 1.81
WNT3P56703 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
WNT3P56703 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
WNT3P56703 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
WNT3P56703 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
WNT3P56703 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
WNT3P56703 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC26.33■■□□□ 1.81
WNT3P56703 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.33■■□□□ 1.81
WNT3P56703 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.32■■□□□ 1.8
WNT3P56703 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
WNT3P56703 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
WNT3P56703 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
WNT3P56703 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
WNT3P56703 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
WNT3P56703 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
WNT3P56703 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.29■■□□□ 1.8
WNT3P56703 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.28■■□□□ 1.8
WNT3P56703 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
WNT3P56703 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.28■■□□□ 1.8
WNT3P56703 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
WNT3P56703 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
WNT3P56703 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.26■■□□□ 1.79
WNT3P56703 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
WNT3P56703 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.25■■□□□ 1.79
WNT3P56703 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
WNT3P56703 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
WNT3P56703 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
WNT3P56703 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
WNT3P56703 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
WNT3P56703 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.24■■□□□ 1.79
WNT3P56703 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
WNT3P56703 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.21■■□□□ 1.79
WNT3P56703 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
WNT3P56703 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
WNT3P56703 AC120057.4-201ENST00000624722 1615 ntBASIC26.2■■□□□ 1.78
WNT3P56703 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.2■■□□□ 1.78
WNT3P56703 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.18■■□□□ 1.78
WNT3P56703 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
WNT3P56703 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
WNT3P56703 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
WNT3P56703 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
WNT3P56703 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
WNT3P56703 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
WNT3P56703 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
WNT3P56703 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.14■■□□□ 1.78
WNT3P56703 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
WNT3P56703 DYNLL1-208ENST00000550178 581 ntBASIC26.14■■□□□ 1.78
WNT3P56703 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.14■■□□□ 1.78
WNT3P56703 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
WNT3P56703 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
WNT3P56703 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.12■■□□□ 1.77
WNT3P56703 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.11■■□□□ 1.77
WNT3P56703 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
WNT3P56703 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.1■■□□□ 1.77
WNT3P56703 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.09■■□□□ 1.77
WNT3P56703 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
WNT3P56703 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
WNT3P56703 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.06■■□□□ 1.76
WNT3P56703 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
WNT3P56703 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
WNT3P56703 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
WNT3P56703 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
WNT3P56703 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
WNT3P56703 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
WNT3P56703 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.02■■□□□ 1.76
WNT3P56703 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
WNT3P56703 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
WNT3P56703 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
WNT3P56703 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
WNT3P56703 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
WNT3P56703 AL031258.1-201ENST00000623562 325 ntBASIC25.97■■□□□ 1.75
WNT3P56703 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.96■■□□□ 1.75
WNT3P56703 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.94■■□□□ 1.74
WNT3P56703 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.93■■□□□ 1.74
WNT3P56703 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
WNT3P56703 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
WNT3P56703 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
WNT3P56703 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
WNT3P56703 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
WNT3P56703 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.89■■□□□ 1.73
WNT3P56703 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
WNT3P56703 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
WNT3P56703 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
WNT3P56703 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
WNT3P56703 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.87■■□□□ 1.73
WNT3P56703 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
WNT3P56703 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
WNT3P56703 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
WNT3P56703 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms