Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.35■■■□□ 2.61
EPHB4P54760 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
EPHB4P54760 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
EPHB4P54760 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
EPHB4P54760 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
EPHB4P54760 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
EPHB4P54760 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
EPHB4P54760 AL391121.1-201ENST00000607967 1349 ntBASIC31.3■■■□□ 2.6
EPHB4P54760 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.3■■■□□ 2.6
EPHB4P54760 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
EPHB4P54760 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
EPHB4P54760 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
EPHB4P54760 MIR7108-201ENST00000614319 87 ntBASIC31.24■■■□□ 2.59
EPHB4P54760 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
EPHB4P54760 AC145285.7-201ENST00000614819 1539 ntBASIC31.24■■■□□ 2.59
EPHB4P54760 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
EPHB4P54760 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
EPHB4P54760 ABHD17AP4-201ENST00000411545 909 ntBASIC31.21■■■□□ 2.59
EPHB4P54760 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
EPHB4P54760 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
EPHB4P54760 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
EPHB4P54760 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.15■■■□□ 2.58
EPHB4P54760 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
EPHB4P54760 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.15■■■□□ 2.58
EPHB4P54760 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.15■■■□□ 2.58
EPHB4P54760 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.13■■■□□ 2.57
EPHB4P54760 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
EPHB4P54760 AL133380.1-201ENST00000506013 324 ntBASIC31.11■■■□□ 2.57
EPHB4P54760 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
EPHB4P54760 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
EPHB4P54760 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.09■■■□□ 2.57
EPHB4P54760 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.08■■■□□ 2.57
EPHB4P54760 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
EPHB4P54760 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.07■■■□□ 2.56
EPHB4P54760 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
EPHB4P54760 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.07■■■□□ 2.56
EPHB4P54760 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.07■■■□□ 2.56
EPHB4P54760 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.07■■■□□ 2.56
EPHB4P54760 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.06■■■□□ 2.56
EPHB4P54760 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
EPHB4P54760 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
EPHB4P54760 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
EPHB4P54760 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31■■■□□ 2.55
EPHB4P54760 MIR3665-201ENST00000578708 105 ntBASIC31■■■□□ 2.55
EPHB4P54760 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.98■■■□□ 2.55
EPHB4P54760 AC087741.3-201ENST00000624270 1347 ntBASIC30.98■■■□□ 2.55
EPHB4P54760 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
EPHB4P54760 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.96■■■□□ 2.55
EPHB4P54760 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
EPHB4P54760 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
EPHB4P54760 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.94■■■□□ 2.54
EPHB4P54760 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.94■■■□□ 2.54
EPHB4P54760 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
EPHB4P54760 HLA-V-202ENST00000446817 847 ntBASIC30.92■■■□□ 2.54
EPHB4P54760 DUX4L28-201ENST00000623687 678 ntBASIC30.92■■■□□ 2.54
EPHB4P54760 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
EPHB4P54760 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
EPHB4P54760 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
EPHB4P54760 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
EPHB4P54760 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
EPHB4P54760 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
EPHB4P54760 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.88■■■□□ 2.53
EPHB4P54760 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.88■■■□□ 2.53
EPHB4P54760 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.88■■■□□ 2.53
EPHB4P54760 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.86■■■□□ 2.53
EPHB4P54760 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
EPHB4P54760 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
EPHB4P54760 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.83■■■□□ 2.53
EPHB4P54760 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.81■■■□□ 2.52
EPHB4P54760 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.81■■■□□ 2.52
EPHB4P54760 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
EPHB4P54760 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.79■■■□□ 2.52
EPHB4P54760 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.77■■■□□ 2.52
EPHB4P54760 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
EPHB4P54760 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
EPHB4P54760 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.75■■■□□ 2.51
EPHB4P54760 MIR762-201ENST00000390236 83 ntBASIC30.74■■■□□ 2.51
EPHB4P54760 AC044849.2-201ENST00000606596 710 ntBASIC30.74■■■□□ 2.51
EPHB4P54760 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.74■■■□□ 2.51
EPHB4P54760 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.74■■■□□ 2.51
EPHB4P54760 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.71■■■□□ 2.51
EPHB4P54760 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
EPHB4P54760 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.69■■■□□ 2.5
EPHB4P54760 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.68■■■□□ 2.5
EPHB4P54760 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
EPHB4P54760 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
EPHB4P54760 AC005559.1-201ENST00000589661 871 ntBASIC30.66■■■□□ 2.5
EPHB4P54760 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
EPHB4P54760 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.65■■■□□ 2.5
EPHB4P54760 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
EPHB4P54760 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.64■■■□□ 2.5
EPHB4P54760 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
EPHB4P54760 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
EPHB4P54760 ZNRF2P2-203ENST00000454624 420 ntBASIC30.63■■■□□ 2.49
EPHB4P54760 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
EPHB4P54760 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.62■■■□□ 2.49
EPHB4P54760 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.61■■■□□ 2.49
EPHB4P54760 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
EPHB4P54760 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.6■■■□□ 2.49
EPHB4P54760 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.58■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms