Protein–RNA interactions for Protein: P0DMP2

SRGAP2B, SLIT-ROBO Rho GTPase-activating protein 2B, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2BP0DMP2 AL162393.1-201ENST00000437852 946 ntBASIC29.98■■■□□ 2.39
SRGAP2BP0DMP2 CAHM-201ENST00000604200 896 ntBASIC29.98■■■□□ 2.39
SRGAP2BP0DMP2 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
SRGAP2BP0DMP2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
SRGAP2BP0DMP2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SRGAP2BP0DMP2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.97■■■□□ 2.39
SRGAP2BP0DMP2 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SRGAP2BP0DMP2 AC145285.7-201ENST00000614819 1539 ntBASIC29.94■■■□□ 2.38
SRGAP2BP0DMP2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.93■■■□□ 2.38
SRGAP2BP0DMP2 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
SRGAP2BP0DMP2 AL391121.1-201ENST00000607967 1349 ntBASIC29.92■■■□□ 2.38
SRGAP2BP0DMP2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SRGAP2BP0DMP2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SRGAP2BP0DMP2 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
SRGAP2BP0DMP2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC29.88■■■□□ 2.37
SRGAP2BP0DMP2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
SRGAP2BP0DMP2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.84■■■□□ 2.37
SRGAP2BP0DMP2 HNRNPLP2-201ENST00000568980 1570 ntBASIC29.84■■■□□ 2.37
SRGAP2BP0DMP2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC29.83■■■□□ 2.37
SRGAP2BP0DMP2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC29.83■■■□□ 2.37
SRGAP2BP0DMP2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
SRGAP2BP0DMP2 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SRGAP2BP0DMP2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SRGAP2BP0DMP2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.8■■■□□ 2.36
SRGAP2BP0DMP2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SRGAP2BP0DMP2 AL133380.1-201ENST00000506013 324 ntBASIC29.8■■■□□ 2.36
SRGAP2BP0DMP2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SRGAP2BP0DMP2 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.78■■■□□ 2.36
SRGAP2BP0DMP2 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SRGAP2BP0DMP2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC29.75■■■□□ 2.35
SRGAP2BP0DMP2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
SRGAP2BP0DMP2 MIR3665-201ENST00000578708 105 ntBASIC29.74■■■□□ 2.35
SRGAP2BP0DMP2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
SRGAP2BP0DMP2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
SRGAP2BP0DMP2 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.73■■■□□ 2.35
SRGAP2BP0DMP2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.72■■■□□ 2.35
SRGAP2BP0DMP2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.72■■■□□ 2.35
SRGAP2BP0DMP2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC29.72■■■□□ 2.35
SRGAP2BP0DMP2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.71■■■□□ 2.35
SRGAP2BP0DMP2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.71■■■□□ 2.35
SRGAP2BP0DMP2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
SRGAP2BP0DMP2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
SRGAP2BP0DMP2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
SRGAP2BP0DMP2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.68■■■□□ 2.34
SRGAP2BP0DMP2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.66■■■□□ 2.34
SRGAP2BP0DMP2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
SRGAP2BP0DMP2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC29.63■■■□□ 2.33
SRGAP2BP0DMP2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SRGAP2BP0DMP2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
SRGAP2BP0DMP2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SRGAP2BP0DMP2 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC29.61■■■□□ 2.33
SRGAP2BP0DMP2 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SRGAP2BP0DMP2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
SRGAP2BP0DMP2 MIR7108-201ENST00000614319 87 ntBASIC29.6■■■□□ 2.33
SRGAP2BP0DMP2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.59■■■□□ 2.33
SRGAP2BP0DMP2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.58■■■□□ 2.33
SRGAP2BP0DMP2 ABHD17AP4-201ENST00000411545 909 ntBASIC29.58■■■□□ 2.33
SRGAP2BP0DMP2 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SRGAP2BP0DMP2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
SRGAP2BP0DMP2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
SRGAP2BP0DMP2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SRGAP2BP0DMP2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.54■■■□□ 2.32
SRGAP2BP0DMP2 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.32
SRGAP2BP0DMP2 AC044849.2-201ENST00000606596 710 ntBASIC29.51■■■□□ 2.31
SRGAP2BP0DMP2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SRGAP2BP0DMP2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
SRGAP2BP0DMP2 AC087741.3-201ENST00000624270 1347 ntBASIC29.49■■■□□ 2.31
SRGAP2BP0DMP2 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.49■■■□□ 2.31
SRGAP2BP0DMP2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.47■■■□□ 2.31
SRGAP2BP0DMP2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.44■■■□□ 2.3
SRGAP2BP0DMP2 DUX4L28-201ENST00000623687 678 ntBASIC29.44■■■□□ 2.3
SRGAP2BP0DMP2 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SRGAP2BP0DMP2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.41■■■□□ 2.3
SRGAP2BP0DMP2 AC005559.1-201ENST00000589661 871 ntBASIC29.41■■■□□ 2.3
SRGAP2BP0DMP2 MIR762-201ENST00000390236 83 ntBASIC29.4■■■□□ 2.3
SRGAP2BP0DMP2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.4■■■□□ 2.3
SRGAP2BP0DMP2 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.38■■■□□ 2.29
SRGAP2BP0DMP2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SRGAP2BP0DMP2 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
SRGAP2BP0DMP2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.36■■■□□ 2.29
SRGAP2BP0DMP2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SRGAP2BP0DMP2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC29.35■■■□□ 2.29
SRGAP2BP0DMP2 HLA-V-202ENST00000446817 847 ntBASIC29.34■■■□□ 2.29
SRGAP2BP0DMP2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
SRGAP2BP0DMP2 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SRGAP2BP0DMP2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SRGAP2BP0DMP2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
SRGAP2BP0DMP2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.31■■■□□ 2.28
SRGAP2BP0DMP2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.31■■■□□ 2.28
SRGAP2BP0DMP2 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SRGAP2BP0DMP2 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SRGAP2BP0DMP2 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SRGAP2BP0DMP2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SRGAP2BP0DMP2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.29■■■□□ 2.28
SRGAP2BP0DMP2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
SRGAP2BP0DMP2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.27■■■□□ 2.28
SRGAP2BP0DMP2 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.26■■■□□ 2.27
SRGAP2BP0DMP2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.26■■■□□ 2.27
SRGAP2BP0DMP2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
SRGAP2BP0DMP2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.24■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms