Protein–RNA interactions for Protein: P0DMP2

SRGAP2B, SLIT-ROBO Rho GTPase-activating protein 2B, humanhuman

Predictions only

Length 458 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2BP0DMP2 AL162393.1-201ENST00000437852 946 ntBASIC29.98■■■□□ 2.39
SRGAP2BP0DMP2 CAHM-201ENST00000604200 896 ntBASIC29.98■■■□□ 2.39
SRGAP2BP0DMP2 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
SRGAP2BP0DMP2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
SRGAP2BP0DMP2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SRGAP2BP0DMP2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.97■■■□□ 2.39
SRGAP2BP0DMP2 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SRGAP2BP0DMP2 AC145285.7-201ENST00000614819 1539 ntBASIC29.94■■■□□ 2.38
SRGAP2BP0DMP2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.93■■■□□ 2.38
SRGAP2BP0DMP2 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
SRGAP2BP0DMP2 AL391121.1-201ENST00000607967 1349 ntBASIC29.92■■■□□ 2.38
SRGAP2BP0DMP2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SRGAP2BP0DMP2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SRGAP2BP0DMP2 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
SRGAP2BP0DMP2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC29.88■■■□□ 2.37
SRGAP2BP0DMP2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
SRGAP2BP0DMP2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.84■■■□□ 2.37
SRGAP2BP0DMP2 HNRNPLP2-201ENST00000568980 1570 ntBASIC29.84■■■□□ 2.37
SRGAP2BP0DMP2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC29.83■■■□□ 2.37
SRGAP2BP0DMP2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC29.83■■■□□ 2.37
SRGAP2BP0DMP2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
SRGAP2BP0DMP2 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SRGAP2BP0DMP2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SRGAP2BP0DMP2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.8■■■□□ 2.36
SRGAP2BP0DMP2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SRGAP2BP0DMP2 AL133380.1-201ENST00000506013 324 ntBASIC29.8■■■□□ 2.36
SRGAP2BP0DMP2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SRGAP2BP0DMP2 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.78■■■□□ 2.36
SRGAP2BP0DMP2 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SRGAP2BP0DMP2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC29.75■■■□□ 2.35
SRGAP2BP0DMP2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
SRGAP2BP0DMP2 MIR3665-201ENST00000578708 105 ntBASIC29.74■■■□□ 2.35
SRGAP2BP0DMP2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
SRGAP2BP0DMP2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
SRGAP2BP0DMP2 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.73■■■□□ 2.35
SRGAP2BP0DMP2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.72■■■□□ 2.35
SRGAP2BP0DMP2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.72■■■□□ 2.35
SRGAP2BP0DMP2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC29.72■■■□□ 2.35
SRGAP2BP0DMP2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.71■■■□□ 2.35
SRGAP2BP0DMP2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.71■■■□□ 2.35
SRGAP2BP0DMP2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
SRGAP2BP0DMP2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
SRGAP2BP0DMP2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
SRGAP2BP0DMP2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.68■■■□□ 2.34
SRGAP2BP0DMP2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.66■■■□□ 2.34
SRGAP2BP0DMP2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
SRGAP2BP0DMP2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC29.63■■■□□ 2.33
SRGAP2BP0DMP2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SRGAP2BP0DMP2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
SRGAP2BP0DMP2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SRGAP2BP0DMP2 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC29.61■■■□□ 2.33
SRGAP2BP0DMP2 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SRGAP2BP0DMP2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
SRGAP2BP0DMP2 MIR7108-201ENST00000614319 87 ntBASIC29.6■■■□□ 2.33
SRGAP2BP0DMP2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.59■■■□□ 2.33
SRGAP2BP0DMP2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.58■■■□□ 2.33
SRGAP2BP0DMP2 ABHD17AP4-201ENST00000411545 909 ntBASIC29.58■■■□□ 2.33
SRGAP2BP0DMP2 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SRGAP2BP0DMP2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
SRGAP2BP0DMP2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
SRGAP2BP0DMP2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SRGAP2BP0DMP2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.54■■■□□ 2.32
SRGAP2BP0DMP2 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.32
SRGAP2BP0DMP2 AC044849.2-201ENST00000606596 710 ntBASIC29.51■■■□□ 2.31
SRGAP2BP0DMP2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SRGAP2BP0DMP2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
SRGAP2BP0DMP2 AC087741.3-201ENST00000624270 1347 ntBASIC29.49■■■□□ 2.31
SRGAP2BP0DMP2 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.49■■■□□ 2.31
SRGAP2BP0DMP2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.47■■■□□ 2.31
SRGAP2BP0DMP2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.44■■■□□ 2.3
SRGAP2BP0DMP2 DUX4L28-201ENST00000623687 678 ntBASIC29.44■■■□□ 2.3
SRGAP2BP0DMP2 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SRGAP2BP0DMP2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.41■■■□□ 2.3
SRGAP2BP0DMP2 AC005559.1-201ENST00000589661 871 ntBASIC29.41■■■□□ 2.3
SRGAP2BP0DMP2 MIR762-201ENST00000390236 83 ntBASIC29.4■■■□□ 2.3
SRGAP2BP0DMP2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.4■■■□□ 2.3
SRGAP2BP0DMP2 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.38■■■□□ 2.29
SRGAP2BP0DMP2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SRGAP2BP0DMP2 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
SRGAP2BP0DMP2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.36■■■□□ 2.29
SRGAP2BP0DMP2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SRGAP2BP0DMP2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC29.35■■■□□ 2.29
SRGAP2BP0DMP2 HLA-V-202ENST00000446817 847 ntBASIC29.34■■■□□ 2.29
SRGAP2BP0DMP2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
SRGAP2BP0DMP2 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SRGAP2BP0DMP2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SRGAP2BP0DMP2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
SRGAP2BP0DMP2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.31■■■□□ 2.28
SRGAP2BP0DMP2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.31■■■□□ 2.28
SRGAP2BP0DMP2 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SRGAP2BP0DMP2 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SRGAP2BP0DMP2 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SRGAP2BP0DMP2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SRGAP2BP0DMP2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.29■■■□□ 2.28
SRGAP2BP0DMP2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
SRGAP2BP0DMP2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.27■■■□□ 2.28
SRGAP2BP0DMP2 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.26■■■□□ 2.27
SRGAP2BP0DMP2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.26■■■□□ 2.27
SRGAP2BP0DMP2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
SRGAP2BP0DMP2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.24■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms