Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
OPHN1O60890 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC28.79■■■□□ 2.2
OPHN1O60890 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
OPHN1O60890 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC28.77■■■□□ 2.2
OPHN1O60890 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC28.76■■■□□ 2.19
OPHN1O60890 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
OPHN1O60890 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.73■■■□□ 2.19
OPHN1O60890 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
OPHN1O60890 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
OPHN1O60890 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
OPHN1O60890 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.68■■■□□ 2.18
OPHN1O60890 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
OPHN1O60890 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
OPHN1O60890 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
OPHN1O60890 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
OPHN1O60890 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
OPHN1O60890 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC28.64■■■□□ 2.17
OPHN1O60890 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
OPHN1O60890 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.63■■■□□ 2.17
OPHN1O60890 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
OPHN1O60890 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC28.62■■■□□ 2.17
OPHN1O60890 AC097358.2-201ENST00000607541 1159 ntBASIC28.62■■■□□ 2.17
OPHN1O60890 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.61■■■□□ 2.17
OPHN1O60890 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
OPHN1O60890 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
OPHN1O60890 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC28.59■■■□□ 2.17
OPHN1O60890 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC28.59■■■□□ 2.17
OPHN1O60890 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC28.59■■■□□ 2.17
OPHN1O60890 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC28.58■■■□□ 2.17
OPHN1O60890 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
OPHN1O60890 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
OPHN1O60890 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
OPHN1O60890 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC28.56■■■□□ 2.16
OPHN1O60890 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
OPHN1O60890 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC28.54■■■□□ 2.16
OPHN1O60890 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC28.54■■■□□ 2.16
OPHN1O60890 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
OPHN1O60890 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
OPHN1O60890 MVK-208ENST00000539696 608 ntTSL 5 BASIC28.52■■■□□ 2.16
OPHN1O60890 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
OPHN1O60890 EBPL-203ENST00000378270 579 ntTSL 2 BASIC28.51■■■□□ 2.15
OPHN1O60890 SETD8P1-201ENST00000623146 1180 ntBASIC28.51■■■□□ 2.15
OPHN1O60890 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
OPHN1O60890 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC28.51■■■□□ 2.15
OPHN1O60890 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
OPHN1O60890 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
OPHN1O60890 AC136428.2-201ENST00000563187 214 ntBASIC28.46■■■□□ 2.15
OPHN1O60890 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC28.46■■■□□ 2.15
OPHN1O60890 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
OPHN1O60890 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
OPHN1O60890 KLF16-203ENST00000592313 508 ntTSL 3 BASIC28.42■■■□□ 2.14
OPHN1O60890 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
OPHN1O60890 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
OPHN1O60890 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
OPHN1O60890 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
OPHN1O60890 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
OPHN1O60890 RPS2P35-201ENST00000443417 897 ntBASIC28.38■■■□□ 2.13
OPHN1O60890 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.38■■■□□ 2.13
OPHN1O60890 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC28.37■■■□□ 2.13
OPHN1O60890 SUZ12P1-203ENST00000578195 985 ntBASIC28.37■■■□□ 2.13
OPHN1O60890 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
OPHN1O60890 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.37■■■□□ 2.13
OPHN1O60890 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
OPHN1O60890 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
OPHN1O60890 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
OPHN1O60890 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
OPHN1O60890 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
OPHN1O60890 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
OPHN1O60890 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC28.31■■■□□ 2.12
OPHN1O60890 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.31■■■□□ 2.12
OPHN1O60890 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
OPHN1O60890 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC28.3■■■□□ 2.12
OPHN1O60890 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
OPHN1O60890 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
OPHN1O60890 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
OPHN1O60890 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
OPHN1O60890 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
OPHN1O60890 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
OPHN1O60890 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
OPHN1O60890 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.26■■■□□ 2.11
OPHN1O60890 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC28.26■■■□□ 2.11
OPHN1O60890 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.26■■■□□ 2.11
OPHN1O60890 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
OPHN1O60890 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
OPHN1O60890 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC28.25■■■□□ 2.11
OPHN1O60890 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
OPHN1O60890 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
OPHN1O60890 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
OPHN1O60890 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.23■■■□□ 2.11
OPHN1O60890 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
OPHN1O60890 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.23■■■□□ 2.11
OPHN1O60890 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
OPHN1O60890 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.21■■■□□ 2.11
OPHN1O60890 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
OPHN1O60890 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC28.21■■■□□ 2.11
OPHN1O60890 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC28.2■■■□□ 2.1
OPHN1O60890 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.1
OPHN1O60890 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC28.2■■■□□ 2.1
OPHN1O60890 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
OPHN1O60890 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.2■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms