Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC40.32■■■■■ 4.05
CHD2O14647 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC40.32■■■■■ 4.05
CHD2O14647 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC40.32■■■■■ 4.05
CHD2O14647 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC40.32■■■■■ 4.04
CHD2O14647 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC40.27■■■■■ 4.04
CHD2O14647 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC40.27■■■■■ 4.04
CHD2O14647 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC40.26■■■■■ 4.04
CHD2O14647 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC40.23■■■■■ 4.03
CHD2O14647 MIR7108-201ENST00000614319 87 ntBASIC40.21■■■■■ 4.03
CHD2O14647 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC40.21■■■■■ 4.03
CHD2O14647 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC40.2■■■■■ 4.03
CHD2O14647 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC40.18■■■■■ 4.02
CHD2O14647 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC40.18■■■■■ 4.02
CHD2O14647 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC40.18■■■■■ 4.02
CHD2O14647 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC40.16■■■■■ 4.02
CHD2O14647 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC40.16■■■■■ 4.02
CHD2O14647 EBPL-202ENST00000378268 680 ntTSL 3 BASIC40.15■■■■■ 4.02
CHD2O14647 DUX4L28-201ENST00000623687 678 ntBASIC40.14■■■■■ 4.02
CHD2O14647 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC40.13■■■■■ 4.02
CHD2O14647 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC40.12■■■■■ 4.01
CHD2O14647 MLEC-202ENST00000412616 841 ntTSL 3 BASIC40.12■■■■■ 4.01
CHD2O14647 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC40.11■■■■■ 4.01
CHD2O14647 MIR3665-201ENST00000578708 105 ntBASIC40.1■■■■■ 4.01
CHD2O14647 ABHD17AP4-201ENST00000411545 909 ntBASIC40.09■■■■■ 4.01
CHD2O14647 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC40.08■■■■■ 4.01
CHD2O14647 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC40.08■■■■■ 4.01
CHD2O14647 AC087741.3-201ENST00000624270 1347 ntBASIC40.07■■■■■ 4
CHD2O14647 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC40.06■■■■■ 4
CHD2O14647 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC40.05■■■■■ 4
CHD2O14647 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC40.02■■■■■ 4
CHD2O14647 HLA-V-202ENST00000446817 847 ntBASIC40■■■■□ 3.99
CHD2O14647 AC044849.2-201ENST00000606596 710 ntBASIC39.97■■■■□ 3.99
CHD2O14647 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC39.95■■■■□ 3.99
CHD2O14647 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC39.95■■■■□ 3.99
CHD2O14647 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC39.95■■■■□ 3.99
CHD2O14647 PVT1-219ENST00000523427 938 ntTSL 3 BASIC39.91■■■■□ 3.98
CHD2O14647 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC39.86■■■■□ 3.97
CHD2O14647 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC39.86■■■■□ 3.97
CHD2O14647 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC39.86■■■■□ 3.97
CHD2O14647 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC39.85■■■■□ 3.97
CHD2O14647 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC39.83■■■■□ 3.97
CHD2O14647 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC39.81■■■■□ 3.96
CHD2O14647 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC39.81■■■■□ 3.96
CHD2O14647 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
CHD2O14647 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC39.8■■■■□ 3.96
CHD2O14647 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC39.8■■■■□ 3.96
CHD2O14647 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC39.8■■■■□ 3.96
CHD2O14647 MBP-237ENST00000579129 1052 ntTSL 5 BASIC39.79■■■■□ 3.96
CHD2O14647 AC005559.1-201ENST00000589661 871 ntBASIC39.77■■■■□ 3.96
CHD2O14647 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC39.76■■■■□ 3.95
CHD2O14647 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.95
CHD2O14647 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.95
CHD2O14647 MIR762-201ENST00000390236 83 ntBASIC39.73■■■■□ 3.95
CHD2O14647 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC39.73■■■■□ 3.95
CHD2O14647 CHML-205ENST00000638160 705 ntTSL 3 BASIC39.72■■■■□ 3.95
CHD2O14647 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC39.7■■■■□ 3.95
CHD2O14647 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC39.68■■■■□ 3.94
CHD2O14647 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC39.67■■■■□ 3.94
CHD2O14647 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC39.66■■■■□ 3.94
CHD2O14647 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC39.65■■■■□ 3.94
CHD2O14647 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC39.62■■■■□ 3.93
CHD2O14647 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC39.61■■■■□ 3.93
CHD2O14647 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC39.59■■■■□ 3.93
CHD2O14647 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC39.56■■■■□ 3.92
CHD2O14647 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC39.56■■■■□ 3.92
CHD2O14647 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC39.56■■■■□ 3.92
CHD2O14647 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC39.56■■■■□ 3.92
CHD2O14647 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC39.55■■■■□ 3.92
CHD2O14647 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC39.55■■■■□ 3.92
CHD2O14647 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC39.55■■■■□ 3.92
CHD2O14647 DENR-202ENST00000455982 1052 ntTSL 5 BASIC39.54■■■■□ 3.92
CHD2O14647 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC39.52■■■■□ 3.92
CHD2O14647 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC39.51■■■■□ 3.92
CHD2O14647 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC39.5■■■■□ 3.91
CHD2O14647 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC39.49■■■■□ 3.91
CHD2O14647 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC39.49■■■■□ 3.91
CHD2O14647 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC39.47■■■■□ 3.91
CHD2O14647 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC39.45■■■■□ 3.91
CHD2O14647 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC39.45■■■■□ 3.91
CHD2O14647 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC39.42■■■■□ 3.9
CHD2O14647 BOD1-206ENST00000480951 814 ntTSL 2 BASIC39.42■■■■□ 3.9
CHD2O14647 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC39.42■■■■□ 3.9
CHD2O14647 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC39.41■■■■□ 3.9
CHD2O14647 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC39.38■■■■□ 3.89
CHD2O14647 ZNRF2P2-203ENST00000454624 420 ntBASIC39.37■■■■□ 3.89
CHD2O14647 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC39.37■■■■□ 3.89
CHD2O14647 HGH1-207ENST00000628266 258 ntTSL 5 BASIC39.36■■■■□ 3.89
CHD2O14647 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
CHD2O14647 RPS2-202ENST00000526522 924 ntTSL 2 BASIC39.35■■■■□ 3.89
CHD2O14647 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC39.35■■■■□ 3.89
CHD2O14647 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC39.34■■■■□ 3.89
CHD2O14647 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC39.33■■■■□ 3.89
CHD2O14647 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC39.31■■■■□ 3.88
CHD2O14647 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
CHD2O14647 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
CHD2O14647 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC39.3■■■■□ 3.88
CHD2O14647 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC39.28■■■■□ 3.88
CHD2O14647 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC39.25■■■■□ 3.87
CHD2O14647 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC39.25■■■■□ 3.87
CHD2O14647 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms