Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SPDYE3A6NKU9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SPDYE3A6NKU9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SPDYE3A6NKU9 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SPDYE3A6NKU9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.76■■■□□ 2.68
SPDYE3A6NKU9 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SPDYE3A6NKU9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
SPDYE3A6NKU9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.75■■■□□ 2.67
SPDYE3A6NKU9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.74■■■□□ 2.67
SPDYE3A6NKU9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.74■■■□□ 2.67
SPDYE3A6NKU9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
SPDYE3A6NKU9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.73■■■□□ 2.67
SPDYE3A6NKU9 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
SPDYE3A6NKU9 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SPDYE3A6NKU9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.72■■■□□ 2.67
SPDYE3A6NKU9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.72■■■□□ 2.67
SPDYE3A6NKU9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
SPDYE3A6NKU9 AC097358.2-201ENST00000607541 1159 ntBASIC31.69■■■□□ 2.66
SPDYE3A6NKU9 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
SPDYE3A6NKU9 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SPDYE3A6NKU9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
SPDYE3A6NKU9 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SPDYE3A6NKU9 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SPDYE3A6NKU9 AC136428.2-201ENST00000563187 214 ntBASIC31.63■■■□□ 2.65
SPDYE3A6NKU9 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
SPDYE3A6NKU9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.6■■■□□ 2.65
SPDYE3A6NKU9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SPDYE3A6NKU9 AL133380.1-201ENST00000506013 324 ntBASIC31.58■■■□□ 2.65
SPDYE3A6NKU9 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SPDYE3A6NKU9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SPDYE3A6NKU9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.57■■■□□ 2.64
SPDYE3A6NKU9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
SPDYE3A6NKU9 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.54■■■□□ 2.64
SPDYE3A6NKU9 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SPDYE3A6NKU9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.54■■■□□ 2.64
SPDYE3A6NKU9 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.53■■■□□ 2.64
SPDYE3A6NKU9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
SPDYE3A6NKU9 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.52■■■□□ 2.64
SPDYE3A6NKU9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SPDYE3A6NKU9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.51■■■□□ 2.64
SPDYE3A6NKU9 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.64
SPDYE3A6NKU9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.51■■■□□ 2.63
SPDYE3A6NKU9 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.63
SPDYE3A6NKU9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.5■■■□□ 2.63
SPDYE3A6NKU9 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.48■■■□□ 2.63
SPDYE3A6NKU9 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SPDYE3A6NKU9 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
SPDYE3A6NKU9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.46■■■□□ 2.63
SPDYE3A6NKU9 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.63
SPDYE3A6NKU9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
SPDYE3A6NKU9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SPDYE3A6NKU9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SPDYE3A6NKU9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.42■■■□□ 2.62
SPDYE3A6NKU9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.42■■■□□ 2.62
SPDYE3A6NKU9 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
SPDYE3A6NKU9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
SPDYE3A6NKU9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SPDYE3A6NKU9 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC31.38■■■□□ 2.61
SPDYE3A6NKU9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
SPDYE3A6NKU9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.37■■■□□ 2.61
SPDYE3A6NKU9 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
SPDYE3A6NKU9 CAHM-201ENST00000604200 896 ntBASIC31.35■■■□□ 2.61
SPDYE3A6NKU9 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
SPDYE3A6NKU9 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
SPDYE3A6NKU9 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SPDYE3A6NKU9 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SPDYE3A6NKU9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.33■■■□□ 2.61
SPDYE3A6NKU9 SUZ12P1-203ENST00000578195 985 ntBASIC31.33■■■□□ 2.61
SPDYE3A6NKU9 AL391121.1-201ENST00000607967 1349 ntBASIC31.31■■■□□ 2.6
SPDYE3A6NKU9 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SPDYE3A6NKU9 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC31.3■■■□□ 2.6
SPDYE3A6NKU9 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.3■■■□□ 2.6
SPDYE3A6NKU9 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SPDYE3A6NKU9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SPDYE3A6NKU9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.29■■■□□ 2.6
SPDYE3A6NKU9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SPDYE3A6NKU9 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SPDYE3A6NKU9 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SPDYE3A6NKU9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SPDYE3A6NKU9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SPDYE3A6NKU9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SPDYE3A6NKU9 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SPDYE3A6NKU9 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.23■■■□□ 2.59
SPDYE3A6NKU9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
SPDYE3A6NKU9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SPDYE3A6NKU9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.18■■■□□ 2.58
SPDYE3A6NKU9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SPDYE3A6NKU9 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SPDYE3A6NKU9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.16■■■□□ 2.58
SPDYE3A6NKU9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.16■■■□□ 2.58
SPDYE3A6NKU9 WASH5P-204ENST00000632292 975 ntBASIC31.16■■■□□ 2.58
SPDYE3A6NKU9 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SPDYE3A6NKU9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SPDYE3A6NKU9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SPDYE3A6NKU9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SPDYE3A6NKU9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.14■■■□□ 2.58
SPDYE3A6NKU9 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
SPDYE3A6NKU9 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SPDYE3A6NKU9 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SPDYE3A6NKU9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms