Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
HTR3EA5X5Y0 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
HTR3EA5X5Y0 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC25.38■■□□□ 1.65
HTR3EA5X5Y0 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC25.37■■□□□ 1.65
HTR3EA5X5Y0 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC25.37■■□□□ 1.65
HTR3EA5X5Y0 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.37■■□□□ 1.65
HTR3EA5X5Y0 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
HTR3EA5X5Y0 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
HTR3EA5X5Y0 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
HTR3EA5X5Y0 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
HTR3EA5X5Y0 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
HTR3EA5X5Y0 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
HTR3EA5X5Y0 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
HTR3EA5X5Y0 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC25.33■■□□□ 1.65
HTR3EA5X5Y0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
HTR3EA5X5Y0 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
HTR3EA5X5Y0 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
HTR3EA5X5Y0 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC25.31■■□□□ 1.64
HTR3EA5X5Y0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
HTR3EA5X5Y0 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
HTR3EA5X5Y0 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
HTR3EA5X5Y0 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.27■■□□□ 1.64
HTR3EA5X5Y0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
HTR3EA5X5Y0 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
HTR3EA5X5Y0 MVK-208ENST00000539696 608 ntTSL 5 BASIC25.25■■□□□ 1.63
HTR3EA5X5Y0 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HTR3EA5X5Y0 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
HTR3EA5X5Y0 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
HTR3EA5X5Y0 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
HTR3EA5X5Y0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
HTR3EA5X5Y0 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
HTR3EA5X5Y0 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.22■■□□□ 1.63
HTR3EA5X5Y0 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
HTR3EA5X5Y0 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
HTR3EA5X5Y0 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
HTR3EA5X5Y0 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
HTR3EA5X5Y0 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
HTR3EA5X5Y0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
HTR3EA5X5Y0 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
HTR3EA5X5Y0 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC25.18■■□□□ 1.62
HTR3EA5X5Y0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
HTR3EA5X5Y0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
HTR3EA5X5Y0 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
HTR3EA5X5Y0 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.17■■□□□ 1.62
HTR3EA5X5Y0 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
HTR3EA5X5Y0 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
HTR3EA5X5Y0 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.15■■□□□ 1.62
HTR3EA5X5Y0 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC25.15■■□□□ 1.62
HTR3EA5X5Y0 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
HTR3EA5X5Y0 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
HTR3EA5X5Y0 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.12■■□□□ 1.61
HTR3EA5X5Y0 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
HTR3EA5X5Y0 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.1■■□□□ 1.61
HTR3EA5X5Y0 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
HTR3EA5X5Y0 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
HTR3EA5X5Y0 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
HTR3EA5X5Y0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.08■■□□□ 1.61
HTR3EA5X5Y0 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.08■■□□□ 1.61
HTR3EA5X5Y0 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
HTR3EA5X5Y0 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
HTR3EA5X5Y0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
HTR3EA5X5Y0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
HTR3EA5X5Y0 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC25.05■■□□□ 1.6
HTR3EA5X5Y0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
HTR3EA5X5Y0 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
HTR3EA5X5Y0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
HTR3EA5X5Y0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
HTR3EA5X5Y0 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
HTR3EA5X5Y0 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
HTR3EA5X5Y0 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.02■■□□□ 1.6
HTR3EA5X5Y0 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
HTR3EA5X5Y0 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
HTR3EA5X5Y0 AC135731.1-201ENST00000569415 2548 ntBASIC25.01■■□□□ 1.59
HTR3EA5X5Y0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
HTR3EA5X5Y0 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
HTR3EA5X5Y0 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
HTR3EA5X5Y0 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC24.99■■□□□ 1.59
HTR3EA5X5Y0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
HTR3EA5X5Y0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
HTR3EA5X5Y0 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
HTR3EA5X5Y0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
HTR3EA5X5Y0 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC24.98■■□□□ 1.59
HTR3EA5X5Y0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
HTR3EA5X5Y0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
HTR3EA5X5Y0 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
HTR3EA5X5Y0 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
HTR3EA5X5Y0 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
HTR3EA5X5Y0 DYNLL1-208ENST00000550178 581 ntBASIC24.96■■□□□ 1.59
HTR3EA5X5Y0 AC120057.4-201ENST00000624722 1615 ntBASIC24.96■■□□□ 1.59
HTR3EA5X5Y0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
HTR3EA5X5Y0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
HTR3EA5X5Y0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
HTR3EA5X5Y0 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
HTR3EA5X5Y0 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC24.95■■□□□ 1.58
HTR3EA5X5Y0 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC24.94■■□□□ 1.58
HTR3EA5X5Y0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
HTR3EA5X5Y0 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HTR3EA5X5Y0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.93■■□□□ 1.58
HTR3EA5X5Y0 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
HTR3EA5X5Y0 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC24.91■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms