Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV25A0A0B4J276 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV25A0A0B4J276 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.87■□□□□ 0.93
TRAV25A0A0B4J276 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.86■□□□□ 0.93
TRAV25A0A0B4J276 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAV25A0A0B4J276 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV25A0A0B4J276 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV25A0A0B4J276 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV25A0A0B4J276 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC20.83■□□□□ 0.93
TRAV25A0A0B4J276 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV25A0A0B4J276 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV25A0A0B4J276 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV25A0A0B4J276 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TRAV25A0A0B4J276 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV25A0A0B4J276 SETD8P1-201ENST00000623146 1180 ntBASIC20.79■□□□□ 0.92
TRAV25A0A0B4J276 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV25A0A0B4J276 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAV25A0A0B4J276 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV25A0A0B4J276 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAV25A0A0B4J276 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV25A0A0B4J276 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV25A0A0B4J276 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TRAV25A0A0B4J276 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV25A0A0B4J276 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV25A0A0B4J276 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV25A0A0B4J276 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV25A0A0B4J276 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV25A0A0B4J276 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV25A0A0B4J276 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV25A0A0B4J276 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.73■□□□□ 0.91
TRAV25A0A0B4J276 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.71■□□□□ 0.91
TRAV25A0A0B4J276 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV25A0A0B4J276 AL133380.1-201ENST00000506013 324 ntBASIC20.69■□□□□ 0.9
TRAV25A0A0B4J276 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV25A0A0B4J276 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV25A0A0B4J276 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV25A0A0B4J276 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV25A0A0B4J276 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV25A0A0B4J276 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV25A0A0B4J276 AC097358.2-201ENST00000607541 1159 ntBASIC20.67■□□□□ 0.9
TRAV25A0A0B4J276 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.67■□□□□ 0.9
TRAV25A0A0B4J276 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV25A0A0B4J276 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV25A0A0B4J276 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV25A0A0B4J276 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TRAV25A0A0B4J276 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV25A0A0B4J276 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV25A0A0B4J276 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV25A0A0B4J276 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC20.62■□□□□ 0.89
TRAV25A0A0B4J276 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV25A0A0B4J276 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV25A0A0B4J276 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV25A0A0B4J276 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV25A0A0B4J276 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV25A0A0B4J276 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.61■□□□□ 0.89
TRAV25A0A0B4J276 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TRAV25A0A0B4J276 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.6■□□□□ 0.89
TRAV25A0A0B4J276 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TRAV25A0A0B4J276 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.59■□□□□ 0.89
TRAV25A0A0B4J276 AC136428.2-201ENST00000563187 214 ntBASIC20.59■□□□□ 0.89
TRAV25A0A0B4J276 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.59■□□□□ 0.89
TRAV25A0A0B4J276 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.58■□□□□ 0.89
TRAV25A0A0B4J276 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAV25A0A0B4J276 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TRAV25A0A0B4J276 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
TRAV25A0A0B4J276 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC20.57■□□□□ 0.88
TRAV25A0A0B4J276 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV25A0A0B4J276 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
TRAV25A0A0B4J276 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.55■□□□□ 0.88
TRAV25A0A0B4J276 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV25A0A0B4J276 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV25A0A0B4J276 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV25A0A0B4J276 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV25A0A0B4J276 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV25A0A0B4J276 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV25A0A0B4J276 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.52■□□□□ 0.88
TRAV25A0A0B4J276 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV25A0A0B4J276 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV25A0A0B4J276 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.51■□□□□ 0.87
TRAV25A0A0B4J276 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.5■□□□□ 0.87
TRAV25A0A0B4J276 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV25A0A0B4J276 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.49■□□□□ 0.87
TRAV25A0A0B4J276 WASH5P-204ENST00000632292 975 ntBASIC20.49■□□□□ 0.87
TRAV25A0A0B4J276 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.49■□□□□ 0.87
TRAV25A0A0B4J276 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV25A0A0B4J276 AL391121.1-201ENST00000607967 1349 ntBASIC20.49■□□□□ 0.87
TRAV25A0A0B4J276 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV25A0A0B4J276 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV25A0A0B4J276 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
TRAV25A0A0B4J276 AC120057.4-201ENST00000624722 1615 ntBASIC20.47■□□□□ 0.87
TRAV25A0A0B4J276 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.47■□□□□ 0.87
TRAV25A0A0B4J276 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV25A0A0B4J276 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.46■□□□□ 0.87
TRAV25A0A0B4J276 CAHM-201ENST00000604200 896 ntBASIC20.46■□□□□ 0.87
TRAV25A0A0B4J276 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV25A0A0B4J276 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV25A0A0B4J276 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.44■□□□□ 0.86
TRAV25A0A0B4J276 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.43■□□□□ 0.86
TRAV25A0A0B4J276 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.42■□□□□ 0.86
TRAV25A0A0B4J276 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms