Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV9-1A0A075B6T8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV9-1A0A075B6T8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.14■□□□□ 0.98
TRAV9-1A0A075B6T8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRAV9-1A0A075B6T8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TRAV9-1A0A075B6T8 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV9-1A0A075B6T8 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV9-1A0A075B6T8 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV9-1A0A075B6T8 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC21.12■□□□□ 0.97
TRAV9-1A0A075B6T8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TRAV9-1A0A075B6T8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV9-1A0A075B6T8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TRAV9-1A0A075B6T8 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV9-1A0A075B6T8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAV9-1A0A075B6T8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRAV9-1A0A075B6T8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRAV9-1A0A075B6T8 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAV9-1A0A075B6T8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAV9-1A0A075B6T8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
TRAV9-1A0A075B6T8 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV9-1A0A075B6T8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.06■□□□□ 0.96
TRAV9-1A0A075B6T8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV9-1A0A075B6T8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV9-1A0A075B6T8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV9-1A0A075B6T8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV9-1A0A075B6T8 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC21.02■□□□□ 0.96
TRAV9-1A0A075B6T8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV9-1A0A075B6T8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRAV9-1A0A075B6T8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
TRAV9-1A0A075B6T8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV9-1A0A075B6T8 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC20.99■□□□□ 0.95
TRAV9-1A0A075B6T8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV9-1A0A075B6T8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV9-1A0A075B6T8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.97■□□□□ 0.95
TRAV9-1A0A075B6T8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV9-1A0A075B6T8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV9-1A0A075B6T8 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV9-1A0A075B6T8 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC20.96■□□□□ 0.95
TRAV9-1A0A075B6T8 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV9-1A0A075B6T8 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV9-1A0A075B6T8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TRAV9-1A0A075B6T8 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV9-1A0A075B6T8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV9-1A0A075B6T8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV9-1A0A075B6T8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV9-1A0A075B6T8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAV9-1A0A075B6T8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV9-1A0A075B6T8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TRAV9-1A0A075B6T8 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAV9-1A0A075B6T8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV9-1A0A075B6T8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
TRAV9-1A0A075B6T8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV9-1A0A075B6T8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV9-1A0A075B6T8 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC20.91■□□□□ 0.94
TRAV9-1A0A075B6T8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV9-1A0A075B6T8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV9-1A0A075B6T8 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV9-1A0A075B6T8 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV9-1A0A075B6T8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV9-1A0A075B6T8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.88■□□□□ 0.93
TRAV9-1A0A075B6T8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV9-1A0A075B6T8 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC20.87■□□□□ 0.93
TRAV9-1A0A075B6T8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV9-1A0A075B6T8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.85■□□□□ 0.93
TRAV9-1A0A075B6T8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
TRAV9-1A0A075B6T8 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV9-1A0A075B6T8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV9-1A0A075B6T8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV9-1A0A075B6T8 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV9-1A0A075B6T8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV9-1A0A075B6T8 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC20.82■□□□□ 0.92
TRAV9-1A0A075B6T8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV9-1A0A075B6T8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV9-1A0A075B6T8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.8■□□□□ 0.92
TRAV9-1A0A075B6T8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV9-1A0A075B6T8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV9-1A0A075B6T8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV9-1A0A075B6T8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV9-1A0A075B6T8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TRAV9-1A0A075B6T8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV9-1A0A075B6T8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
TRAV9-1A0A075B6T8 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.75■□□□□ 0.91
TRAV9-1A0A075B6T8 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV9-1A0A075B6T8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.73■□□□□ 0.91
TRAV9-1A0A075B6T8 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV9-1A0A075B6T8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV9-1A0A075B6T8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV9-1A0A075B6T8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TRAV9-1A0A075B6T8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV9-1A0A075B6T8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
TRAV9-1A0A075B6T8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
TRAV9-1A0A075B6T8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.68■□□□□ 0.9
TRAV9-1A0A075B6T8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
TRAV9-1A0A075B6T8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV9-1A0A075B6T8 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV9-1A0A075B6T8 AC120057.4-201ENST00000624722 1615 ntBASIC20.66■□□□□ 0.9
TRAV9-1A0A075B6T8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV9-1A0A075B6T8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
TRAV9-1A0A075B6T8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV9-1A0A075B6T8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms