Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 AC073150.1-201ENST00000450406 1084 ntBASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 AC022494.1-201ENST00000466044 728 ntBASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 NUP210P1-202ENST00000504322 710 ntBASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 BAP1-211ENST00000615113 489 ntBASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 BX679664.3-201ENST00000414070 555 ntBASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 AL592076.1-201ENST00000424448 303 ntBASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 PDIA3P2-201ENST00000428073 158 ntBASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 AC113935.1-201ENST00000471722 555 ntBASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 AC026803.1-201ENST00000569130 274 ntBASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 AC091812.3-201ENST00000621362 345 ntBASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 AL139158.3-201ENST00000641212 1562 ntBASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 AC005562.1-201ENST00000583030 3219 ntBASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 AC061965.1-201ENST00000560524 1465 ntBASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PARPBPQ9NWS1 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
PARPBPQ9NWS1 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
PARPBPQ9NWS1 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms