Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.48□□□□□ -0.41
SLC6A9P48067 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SLC6A9P48067 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SLC6A9P48067 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
SLC6A9P48067 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SLC6A9P48067 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SLC6A9P48067 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SLC6A9P48067 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SLC6A9P48067 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.47□□□□□ -0.41
SLC6A9P48067 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.47□□□□□ -0.41
SLC6A9P48067 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.47□□□□□ -0.41
SLC6A9P48067 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.47□□□□□ -0.41
SLC6A9P48067 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SLC6A9P48067 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
SLC6A9P48067 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
SLC6A9P48067 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC12.47□□□□□ -0.41
SLC6A9P48067 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SLC6A9P48067 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.47□□□□□ -0.41
SLC6A9P48067 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
SLC6A9P48067 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.47□□□□□ -0.41
SLC6A9P48067 HMGA1P1-201ENST00000415560 1062 ntBASIC12.47□□□□□ -0.41
SLC6A9P48067 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.47□□□□□ -0.41
SLC6A9P48067 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
SLC6A9P48067 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.47□□□□□ -0.41
SLC6A9P48067 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 RPL18P13-201ENST00000478088 569 ntBASIC12.47□□□□□ -0.41
SLC6A9P48067 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.47□□□□□ -0.41
SLC6A9P48067 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
SLC6A9P48067 SCARNA21-201ENST00000517026 139 ntBASIC12.47□□□□□ -0.41
SLC6A9P48067 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.47□□□□□ -0.41
SLC6A9P48067 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 AC003686.1-201ENST00000550956 1034 ntBASIC12.47□□□□□ -0.41
SLC6A9P48067 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.47□□□□□ -0.41
SLC6A9P48067 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.47□□□□□ -0.41
SLC6A9P48067 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.47□□□□□ -0.41
SLC6A9P48067 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.47□□□□□ -0.41
SLC6A9P48067 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.47□□□□□ -0.41
SLC6A9P48067 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.47□□□□□ -0.41
SLC6A9P48067 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
SLC6A9P48067 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.47□□□□□ -0.41
SLC6A9P48067 AC092299.1-201ENST00000632679 757 ntBASIC12.47□□□□□ -0.41
SLC6A9P48067 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
SLC6A9P48067 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 AC005014.1-201ENST00000432006 2976 ntBASIC12.47□□□□□ -0.41
SLC6A9P48067 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC12.47□□□□□ -0.41
SLC6A9P48067 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC6A9P48067 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SLC6A9P48067 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
SLC6A9P48067 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SLC6A9P48067 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SLC6A9P48067 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SLC6A9P48067 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.46□□□□□ -0.41
SLC6A9P48067 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SLC6A9P48067 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SLC6A9P48067 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SLC6A9P48067 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SLC6A9P48067 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SLC6A9P48067 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SLC6A9P48067 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SLC6A9P48067 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SLC6A9P48067 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SLC6A9P48067 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SLC6A9P48067 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SLC6A9P48067 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.46□□□□□ -0.41
SLC6A9P48067 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SLC6A9P48067 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SLC6A9P48067 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SLC6A9P48067 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
SLC6A9P48067 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SLC6A9P48067 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SLC6A9P48067 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SLC6A9P48067 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
SLC6A9P48067 AC114271.1-201ENST00000612689 2813 ntBASIC12.46□□□□□ -0.41
SLC6A9P48067 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.46□□□□□ -0.41
SLC6A9P48067 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SLC6A9P48067 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms