RNA–Protein interactions for RNA: ENST00000564469.1

AP003096.1-203, humanhuman

TSL 3 BASIC

Gene AP003096.1, Length 563 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003096.1-203ENST00000564469 NISCHQ9Y2I1 1504 aa36.95■■■■□ 3.51
AP003096.1-203ENST00000564469 ABCC9O60706 1549 aa33.05■■■□□ 2.88
AP003096.1-203ENST00000564469 CCDC180Q9P1Z9 1646 aa32.91■■■□□ 2.86
AP003096.1-203ENST00000564469 RB1CC1Q8TDY2 1594 aa31.37■■■□□ 2.61
AP003096.1-203ENST00000564469 DCAF8L2P0C7V8 631 aa31.3■■■□□ 2.6
AP003096.1-203ENST00000564469 NACADO15069 1562 aa31.2■■■□□ 2.58
AP003096.1-203ENST00000564469 DNAJC5BQ9UF47 199 aa31.09■■■□□ 2.57
AP003096.1-203ENST00000564469 PABPN1Q86U42 306 aaKnown RBP eCLIP30.91■■■□□ 2.54
AP003096.1-203ENST00000564469 MYO15BQ96JP2 1530 aa30.82■■■□□ 2.52
AP003096.1-203ENST00000564469 ZCCHC6Q5VYS8 1495 aaKnown RBP30.62■■■□□ 2.49
AP003096.1-203ENST00000564469 UNC13AQ9UPW8 1703 aa30.54■■■□□ 2.48
AP003096.1-203ENST00000564469 BICRAQ9NZM4 1560 aa30.53■■■□□ 2.48
AP003096.1-203ENST00000564469 DCAF1Q9Y4B6 1507 aa30.47■■■□□ 2.47
AP003096.1-203ENST00000564469 SCRIBQ14160 1630 aa30.11■■■□□ 2.41
AP003096.1-203ENST00000564469 SHROOM4Q9ULL8 1493 aa30.03■■■□□ 2.4
AP003096.1-203ENST00000564469 CC2D2AQ9P2K1 1620 aa29.77■■■□□ 2.36
AP003096.1-203ENST00000564469 CECR2Q9BXF3 1484 aa29.74■■■□□ 2.35
AP003096.1-203ENST00000564469 EIF4G1Q04637 1599 aaKnown RBP29.73■■■□□ 2.35
AP003096.1-203ENST00000564469 NCAPD3P42695 1498 aa28.91■■■□□ 2.22
AP003096.1-203ENST00000564469 ATAD2BQ9ULI0 1458 aa28.85■■■□□ 2.21
AP003096.1-203ENST00000564469 SMARCA4P51532 1647 aa28.72■■■□□ 2.19
AP003096.1-203ENST00000564469 SMARCA2P51531 1590 aa28.66■■■□□ 2.18
AP003096.1-203ENST00000564469 BAZ1AQ9NRL2 1556 aaPredicted RBP28.61■■■□□ 2.17
AP003096.1-203ENST00000564469 HMGXB3Q12766 1538 aa28.59■■■□□ 2.17
AP003096.1-203ENST00000564469 BAZ1BQ9UIG0 1483 aaKnown RBP28.51■■■□□ 2.15
AP003096.1-203ENST00000564469 MROH2BQ7Z745 1585 aa28.5■■■□□ 2.15
AP003096.1-203ENST00000564469 ERCC6Q03468 1493 aa28.46■■■□□ 2.15
AP003096.1-203ENST00000564469 PEG3Q9GZU2 1588 aa28.45■■■□□ 2.14
AP003096.1-203ENST00000564469 NESP48681 1621 aa28.43■■■□□ 2.14
AP003096.1-203ENST00000564469 DNAJC5Q9H3Z4 198 aa28.39■■■□□ 2.14
AP003096.1-203ENST00000564469 CUX2O14529 1486 aa28.35■■■□□ 2.13
AP003096.1-203ENST00000564469 LAMC3Q9Y6N6 1575 aa28.11■■■□□ 2.09
AP003096.1-203ENST00000564469 WIZO95785 1651 aa28.09■■■□□ 2.09
AP003096.1-203ENST00000564469 CADPSQ9ULU8 1353 aa28.07■■■□□ 2.08
AP003096.1-203ENST00000564469 PDS5BQ9NTI5 1447 aa28.05■■■□□ 2.08
AP003096.1-203ENST00000564469 RSF1Q96T23 1441 aaPredicted RBP28.01■■■□□ 2.07
AP003096.1-203ENST00000564469 THOC2Q8NI27 1593 aaKnown RBP27.99■■■□□ 2.07
AP003096.1-203ENST00000564469 KIF21AQ7Z4S6 1674 aa27.88■■■□□ 2.05
AP003096.1-203ENST00000564469 MRC2Q9UBG0 1479 aa27.76■■■□□ 2.04
AP003096.1-203ENST00000564469 TOP2AP11388 1531 aaKnown RBP27.73■■■□□ 2.03
AP003096.1-203ENST00000564469 CFTRP13569 1480 aa27.73■■■□□ 2.03
AP003096.1-203ENST00000564469 FANCD2Q9BXW9 1451 aa27.7■■■□□ 2.02
AP003096.1-203ENST00000564469 CEP164Q9UPV0 1460 aa27.66■■■□□ 2.02
AP003096.1-203ENST00000564469 WDR62O43379 1518 aa27.66■■■□□ 2.02
AP003096.1-203ENST00000564469 CCDC88BA6NC98 1476 aa27.53■■■□□ 2
AP003096.1-203ENST00000564469 URB2Q14146 1524 aaKnown RBP27.47■■□□□ 1.99
AP003096.1-203ENST00000564469 OSCARQ8IYS5 282 aa27.22■■□□□ 1.95
AP003096.1-203ENST00000564469 TRIM41Q8WV44 630 aa27.18■■□□□ 1.94
AP003096.1-203ENST00000564469 TOPBP1Q92547 1522 aa27.17■■□□□ 1.94
AP003096.1-203ENST00000564469 PRDM2Q13029 1718 aa27.15■■□□□ 1.94
AP003096.1-203ENST00000564469 ZNF608Q9ULD9 1512 aaPredicted RBP27.15■■□□□ 1.94
AP003096.1-203ENST00000564469 IFT140Q96RY7 1462 aa27.13■■□□□ 1.93
AP003096.1-203ENST00000564469 ABCC8Q09428 1581 aa27.07■■□□□ 1.92
AP003096.1-203ENST00000564469 DNMBPQ6XZF7 1577 aa27.01■■□□□ 1.92
AP003096.1-203ENST00000564469 AQRO60306 1485 aaKnown RBP eCLIP26.94■■□□□ 1.9
AP003096.1-203ENST00000564469 SUPT5HO00267 1087 aaKnown RBP26.93■■□□□ 1.9
AP003096.1-203ENST00000564469 POLA1P09884 1462 aaPredicted RBP26.91■■□□□ 1.9
AP003096.1-203ENST00000564469 RAD54L2Q9Y4B4 1467 aa26.87■■□□□ 1.89
AP003096.1-203ENST00000564469 TARBP1Q13395 1621 aaKnown RBP26.87■■□□□ 1.89
AP003096.1-203ENST00000564469 EIF4G3O43432 1585 aaKnown RBP26.84■■□□□ 1.89
AP003096.1-203ENST00000564469 SOGA1O94964 1423 aa26.84■■□□□ 1.89
AP003096.1-203ENST00000564469 TDRD9Q8NDG6 1382 aaKnown RBP26.83■■□□□ 1.88
AP003096.1-203ENST00000564469 FBLN2P98095 1184 aa26.77■■□□□ 1.88
AP003096.1-203ENST00000564469 CUX1P39880 1505 aa26.75■■□□□ 1.87
AP003096.1-203ENST00000564469 FGD5Q6ZNL6 1462 aa26.74■■□□□ 1.87
AP003096.1-203ENST00000564469 RIMBP3CA6NJZ7 1639 aa26.69■■□□□ 1.86
AP003096.1-203ENST00000564469 RIMBP3BA6NNM3 1639 aa26.69■■□□□ 1.86
AP003096.1-203ENST00000564469 RIMBP3Q9UFD9 1639 aa26.69■■□□□ 1.86
AP003096.1-203ENST00000564469 ARHGEF11O15085 1522 aa26.67■■□□□ 1.86
AP003096.1-203ENST00000564469 CYB5RLQ6IPT4 315 aa26.61■■□□□ 1.85
AP003096.1-203ENST00000564469 SNAPC4Q5SXM2 1469 aa26.59■■□□□ 1.85
AP003096.1-203ENST00000564469 CHD1O14646 1710 aa26.57■■□□□ 1.84
AP003096.1-203ENST00000564469 CHMP7Q8WUX9 453 aaPredicted RBP26.57■■□□□ 1.84
AP003096.1-203ENST00000564469 GRIN2BQ13224 1484 aa26.54■■□□□ 1.84
AP003096.1-203ENST00000564469 WDR97A6NE52 1622 aa26.5■■□□□ 1.83
AP003096.1-203ENST00000564469 MAGI1Q96QZ7 1491 aaPredicted RBP26.49■■□□□ 1.83
AP003096.1-203ENST00000564469 GAPVD1Q14C86 1478 aa26.47■■□□□ 1.83
AP003096.1-203ENST00000564469 ABCA10Q8WWZ4 1543 aa26.45■■□□□ 1.83
AP003096.1-203ENST00000564469 ARAP1Q96P48 1450 aa26.45■■□□□ 1.82
AP003096.1-203ENST00000564469 SYNJ2O15056 1496 aa26.42■■□□□ 1.82
AP003096.1-203ENST00000564469 WRNQ14191 1432 aaPredicted RBP eCLIP26.39■■□□□ 1.82
AP003096.1-203ENST00000564469 CLASP1Q7Z460 1538 aa26.39■■□□□ 1.81
AP003096.1-203ENST00000564469 SYNJ1O43426 1573 aa26.33■■□□□ 1.8
AP003096.1-203ENST00000564469 ABCA5Q8WWZ7 1642 aa26.32■■□□□ 1.8
AP003096.1-203ENST00000564469 TOP2BQ02880 1626 aa26.28■■□□□ 1.8
AP003096.1-203ENST00000564469 PBRM1Q86U86 1689 aa26.26■■□□□ 1.79
AP003096.1-203ENST00000564469 TRHP20396 242 aaPredicted RBP26.24■■□□□ 1.79
AP003096.1-203ENST00000564469 BIVM-ERCC5R4GMW8 1640 aa26.23■■□□□ 1.79
AP003096.1-203ENST00000564469 GRIN2AQ12879 1464 aa26.18■■□□□ 1.78
AP003096.1-203ENST00000564469 FHAD1B1AJZ9 1412 aa26.14■■□□□ 1.78
AP003096.1-203ENST00000564469 NUP160Q12769 1436 aa26.12■■□□□ 1.77
AP003096.1-203ENST00000564469 ADAMTS12P58397 1594 aa26.12■■□□□ 1.77
AP003096.1-203ENST00000564469 ERICH3Q5RHP9 1530 aa26.08■■□□□ 1.77
AP003096.1-203ENST00000564469 CEP170Q5SW79 1584 aa26.06■■□□□ 1.76
AP003096.1-203ENST00000564469 ERCC6L2Q5T890 1561 aa26.04■■□□□ 1.76
AP003096.1-203ENST00000564469 JPH4Q96JJ6 628 aa25.96■■□□□ 1.75
AP003096.1-203ENST00000564469 IGF1RP08069 1367 aa25.95■■□□□ 1.74
AP003096.1-203ENST00000564469 PRG4Q92954 1404 aaPredicted RBP25.89■■□□□ 1.74
AP003096.1-203ENST00000564469 SHROOM2Q13796 1616 aa25.88■■□□□ 1.73
AP003096.1-203ENST00000564469 KIF27Q86VH2 1401 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 252.5 ms