Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
SLC1A1P43005 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A1P43005 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A1P43005 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A1P43005 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A1P43005 AC018735.1-201ENST00000437208 1502 ntBASIC14.65□□□□□ -0.06
SLC1A1P43005 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A1P43005 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A1P43005 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A1P43005 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A1P43005 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A1P43005 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A1P43005 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A1P43005 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC1A1P43005 AC067931.2-201ENST00000623655 2003 ntBASIC14.65□□□□□ -0.06
SLC1A1P43005 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A1P43005 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC1A1P43005 RHPN1-AS1-201ENST00000518049 1918 ntBASIC14.64□□□□□ -0.07
SLC1A1P43005 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A1P43005 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A1P43005 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A1P43005 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC1A1P43005 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A1P43005 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC1A1P43005 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC1A1P43005 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A1P43005 AC020763.3-201ENST00000625095 2904 ntBASIC14.64□□□□□ -0.07
SLC1A1P43005 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A1P43005 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A1P43005 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A1P43005 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A1P43005 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A1P43005 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SLC1A1P43005 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A1P43005 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A1P43005 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A1P43005 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A1P43005 RN7SKP214-201ENST00000364208 315 ntBASIC14.64□□□□□ -0.07
SLC1A1P43005 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A1P43005 AC007279.1-201ENST00000448547 837 ntBASIC14.64□□□□□ -0.07
SLC1A1P43005 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A1P43005 AC125604.1-201ENST00000496255 707 ntBASIC14.64□□□□□ -0.07
SLC1A1P43005 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SLC1A1P43005 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A1P43005 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.64□□□□□ -0.07
SLC1A1P43005 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A1P43005 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.64□□□□□ -0.07
SLC1A1P43005 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC1A1P43005 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC1A1P43005 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A1P43005 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
SLC1A1P43005 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A1P43005 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A1P43005 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SLC1A1P43005 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A1P43005 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A1P43005 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC1A1P43005 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.63□□□□□ -0.07
SLC1A1P43005 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.63□□□□□ -0.07
SLC1A1P43005 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.63□□□□□ -0.07
SLC1A1P43005 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.63□□□□□ -0.07
SLC1A1P43005 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 AC008040.5-201ENST00000599781 1781 ntBASIC14.63□□□□□ -0.07
SLC1A1P43005 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.63□□□□□ -0.07
SLC1A1P43005 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 AP000437.1-201ENST00000624057 2085 ntBASIC14.63□□□□□ -0.07
SLC1A1P43005 AC115284.2-201ENST00000624646 2054 ntBASIC14.63□□□□□ -0.07
SLC1A1P43005 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.63□□□□□ -0.07
SLC1A1P43005 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.63□□□□□ -0.07
SLC1A1P43005 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.63□□□□□ -0.07
SLC1A1P43005 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.63□□□□□ -0.07
SLC1A1P43005 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.63□□□□□ -0.07
SLC1A1P43005 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.63□□□□□ -0.07
SLC1A1P43005 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.63□□□□□ -0.07
SLC1A1P43005 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.63□□□□□ -0.07
SLC1A1P43005 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SLC1A1P43005 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SLC1A1P43005 AC091271.1-201ENST00000611877 1162 ntBASIC14.63□□□□□ -0.07
SLC1A1P43005 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.63□□□□□ -0.07
SLC1A1P43005 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
SLC1A1P43005 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.63□□□□□ -0.07
SLC1A1P43005 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.63□□□□□ -0.07
SLC1A1P43005 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms