Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 BX679664.3-201ENST00000414070 555 ntBASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 AC073869.2-201ENST00000417338 1026 ntBASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 RPL8P2-201ENST00000430538 502 ntBASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 AC113935.1-201ENST00000471722 555 ntBASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 IGLV3-15-201ENST00000518356 244 ntBASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 AC007326.1-201ENST00000604539 458 ntBASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 NCLP1-201ENST00000445357 1963 ntBASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 COL6A4P2-202ENST00000504443 2753 ntBASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 CAP2P1-201ENST00000557743 1390 ntBASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 AC019193.1-201ENST00000506678 823 ntBASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 AL606495.2-201ENST00000605867 535 ntBASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 AC051619.9-201ENST00000623237 597 ntBASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TTC39BQ5VTQ0 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms