RNA–Protein interactions for RNA: ENST00000553712.1

AL139193.2-201, humanhuman

TSL 1 (best) BASIC

Gene AL139193.2, Length 1,954 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139193.2-201ENST00000553712 NISCHQ9Y2I1 1504 aa30.18■■■□□ 2.42
AL139193.2-201ENST00000553712 CCDC180Q9P1Z9 1646 aa26.11■■□□□ 1.77
AL139193.2-201ENST00000553712 ZCCHC6Q5VYS8 1495 aaKnown RBP25.43■■□□□ 1.66
AL139193.2-201ENST00000553712 DCAF1Q9Y4B6 1507 aa24.95■■□□□ 1.58
AL139193.2-201ENST00000553712 SHROOM4Q9ULL8 1493 aa24.92■■□□□ 1.58
AL139193.2-201ENST00000553712 DCAF8L2P0C7V8 631 aa24.78■■□□□ 1.56
AL139193.2-201ENST00000553712 MYO15BQ96JP2 1530 aa24.48■■□□□ 1.51
AL139193.2-201ENST00000553712 SUPT5HO00267 1087 aaKnown RBP24.33■■□□□ 1.49
AL139193.2-201ENST00000553712 ABCC9O60706 1549 aa24.29■■□□□ 1.48
AL139193.2-201ENST00000553712 NACADO15069 1562 aa24.21■■□□□ 1.47
AL139193.2-201ENST00000553712 SCRIBQ14160 1630 aa24.06■■□□□ 1.44
AL139193.2-201ENST00000553712 RB1CC1Q8TDY2 1594 aa23.89■■□□□ 1.41
AL139193.2-201ENST00000553712 CHIC1Q5VXU3 224 aa23.78■■□□□ 1.4
AL139193.2-201ENST00000553712 RSF1Q96T23 1441 aaPredicted RBP23.58■■□□□ 1.37
AL139193.2-201ENST00000553712 UNC13AQ9UPW8 1703 aa23.5■■□□□ 1.35
AL139193.2-201ENST00000553712 CECR2Q9BXF3 1484 aa23.43■■□□□ 1.34
AL139193.2-201ENST00000553712 MROH2BQ7Z745 1585 aa23.34■■□□□ 1.33
AL139193.2-201ENST00000553712 BAZ1AQ9NRL2 1556 aaPredicted RBP23.26■■□□□ 1.31
AL139193.2-201ENST00000553712 WIZO95785 1651 aa23.2■■□□□ 1.3
AL139193.2-201ENST00000553712 BICRAQ9NZM4 1560 aa23.2■■□□□ 1.3
AL139193.2-201ENST00000553712 SMARCA4P51532 1647 aa23.11■■□□□ 1.29
AL139193.2-201ENST00000553712 HRCP23327 699 aa23.07■■□□□ 1.28
AL139193.2-201ENST00000553712 AEBP2Q6ZN18 517 aaPredicted RBP23.01■■□□□ 1.27
AL139193.2-201ENST00000553712 PABPN1Q86U42 306 aaKnown RBP eCLIP23■■□□□ 1.27
AL139193.2-201ENST00000553712 LOC105371045A0A1W2PR82 267 aa23■■□□□ 1.27
AL139193.2-201ENST00000553712 PCGF6Q9BYE7 350 aa22.96■■□□□ 1.27
AL139193.2-201ENST00000553712 TOP2AP11388 1531 aaKnown RBP22.93■■□□□ 1.26
AL139193.2-201ENST00000553712 PEG3Q9GZU2 1588 aa22.81■■□□□ 1.24
AL139193.2-201ENST00000553712 SMARCA2P51531 1590 aa22.75■■□□□ 1.23
AL139193.2-201ENST00000553712 EIF4G1Q04637 1599 aaKnown RBP22.74■■□□□ 1.23
AL139193.2-201ENST00000553712 TRIM41Q8WV44 630 aa22.72■■□□□ 1.23
AL139193.2-201ENST00000553712 CCDC88BA6NC98 1476 aa22.72■■□□□ 1.23
AL139193.2-201ENST00000553712 ATAD2BQ9ULI0 1458 aa22.61■■□□□ 1.21
AL139193.2-201ENST00000553712 TRIM26Q12899 539 aaPredicted RBP22.61■■□□□ 1.21
AL139193.2-201ENST00000553712 PPARGC1BQ86YN6 1023 aaKnown RBP22.5■■□□□ 1.19
AL139193.2-201ENST00000553712 BAZ1BQ9UIG0 1483 aaKnown RBP22.49■■□□□ 1.19
AL139193.2-201ENST00000553712 FAM9AQ8IZU1 332 aaPredicted RBP22.45■■□□□ 1.18
AL139193.2-201ENST00000553712 ABCC8Q09428 1581 aa22.39■■□□□ 1.17
AL139193.2-201ENST00000553712 NCAPD3P42695 1498 aa22.34■■□□□ 1.17
AL139193.2-201ENST00000553712 HMGXB3Q12766 1538 aa22.34■■□□□ 1.17
AL139193.2-201ENST00000553712 EHMT2Q96KQ7 1210 aa22.19■■□□□ 1.14
AL139193.2-201ENST00000553712 WRNQ14191 1432 aaPredicted RBP eCLIP22.17■■□□□ 1.14
AL139193.2-201ENST00000553712 ZEB1P37275 1124 aaPredicted RBP22.16■■□□□ 1.14
AL139193.2-201ENST00000553712 EEA1Q15075 1411 aa22.09■■□□□ 1.13
AL139193.2-201ENST00000553712 SYNJ1O43426 1573 aa22.08■■□□□ 1.13
AL139193.2-201ENST00000553712 SOGA1O94964 1423 aa22.06■■□□□ 1.12
AL139193.2-201ENST00000553712 CC2D2AQ9P2K1 1620 aa22.01■■□□□ 1.11
AL139193.2-201ENST00000553712 CFTRP13569 1480 aa21.97■■□□□ 1.11
AL139193.2-201ENST00000553712 RUSC2Q8N2Y8 1516 aa21.97■■□□□ 1.11
AL139193.2-201ENST00000553712 TOP2BQ02880 1626 aa21.96■■□□□ 1.11
AL139193.2-201ENST00000553712 CSRNP3Q8WYN3 585 aa21.94■■□□□ 1.1
AL139193.2-201ENST00000553712 BIVM-ERCC5R4GMW8 1640 aa21.94■■□□□ 1.1
AL139193.2-201ENST00000553712 PRDM2Q13029 1718 aa21.93■■□□□ 1.1
AL139193.2-201ENST00000553712 TNIKQ9UKE5 1360 aa21.84■■□□□ 1.09
AL139193.2-201ENST00000553712 CEP162Q5TB80 1403 aa21.81■■□□□ 1.08
AL139193.2-201ENST00000553712 CADPSQ9ULU8 1353 aa21.8■■□□□ 1.08
AL139193.2-201ENST00000553712 GOLGA3Q08378 1498 aa21.8■■□□□ 1.08
AL139193.2-201ENST00000553712 KIF21BO75037 1637 aa21.8■■□□□ 1.08
AL139193.2-201ENST00000553712 CUX1P39880 1505 aa21.79■■□□□ 1.08
AL139193.2-201ENST00000553712 CEP164Q9UPV0 1460 aa21.76■■□□□ 1.07
AL139193.2-201ENST00000553712 UBTFP17480 764 aaKnown RBP21.69■■□□□ 1.06
AL139193.2-201ENST00000553712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.63■■□□□ 1.05
AL139193.2-201ENST00000553712 RAPGEF2Q9Y4G8 1499 aa21.58■■□□□ 1.05
AL139193.2-201ENST00000553712 CCER1Q8TC90 406 aaPredicted RBP21.57■■□□□ 1.04
AL139193.2-201ENST00000553712 KIF27Q86VH2 1401 aa21.57■■□□□ 1.04
AL139193.2-201ENST00000553712 ERICH3Q5RHP9 1530 aa21.56■■□□□ 1.04
AL139193.2-201ENST00000553712 FANCD2Q9BXW9 1451 aa21.56■■□□□ 1.04
AL139193.2-201ENST00000553712 PRXQ9BXM0 1461 aa21.55■■□□□ 1.04
AL139193.2-201ENST00000553712 LAMC3Q9Y6N6 1575 aa21.51■■□□□ 1.03
AL139193.2-201ENST00000553712 TTBK1Q5TCY1 1321 aaPredicted RBP21.5■■□□□ 1.03
AL139193.2-201ENST00000553712 NESP48681 1621 aa21.48■■□□□ 1.03
AL139193.2-201ENST00000553712 FGD5Q6ZNL6 1462 aa21.47■■□□□ 1.03
AL139193.2-201ENST00000553712 CLIP1P30622 1438 aa21.46■■□□□ 1.03
AL139193.2-201ENST00000553712 DNMBPQ6XZF7 1577 aa21.45■■□□□ 1.02
AL139193.2-201ENST00000553712 CUX2O14529 1486 aa21.41■■□□□ 1.02
AL139193.2-201ENST00000553712 TOPBP1Q92547 1522 aa21.38■■□□□ 1.01
AL139193.2-201ENST00000553712 IGF1RP08069 1367 aa21.36■■□□□ 1.01
AL139193.2-201ENST00000553712 VPS8Q8N3P4 1428 aa21.34■■□□□ 1.01
AL139193.2-201ENST00000553712 DNAJC5BQ9UF47 199 aa21.34■■□□□ 1.01
AL139193.2-201ENST00000553712 PDS5BQ9NTI5 1447 aa21.31■■□□□ 1
AL139193.2-201ENST00000553712 POLA1P09884 1462 aaPredicted RBP21.31■■□□□ 1
AL139193.2-201ENST00000553712 ABCA10Q8WWZ4 1543 aa21.3■■□□□ 1
AL139193.2-201ENST00000553712 URB2Q14146 1524 aaKnown RBP21.27■■□□□ 1
AL139193.2-201ENST00000553712 RAD54L2Q9Y4B4 1467 aa21.25■□□□□ 0.99
AL139193.2-201ENST00000553712 CARMIL1Q5VZK9 1371 aa21.25■□□□□ 0.99
AL139193.2-201ENST00000553712 KIF21AQ7Z4S6 1674 aa21.24■□□□□ 0.99
AL139193.2-201ENST00000553712 SCAF1Q9H7N4 1312 aaKnown RBP21.22■□□□□ 0.99
AL139193.2-201ENST00000553712 ARAP1Q96P48 1450 aa21.21■□□□□ 0.99
AL139193.2-201ENST00000553712 WDR97A6NE52 1622 aa21.21■□□□□ 0.99
AL139193.2-201ENST00000553712 RANGAP1P46060 587 aaPredicted RBP21.19■□□□□ 0.98
AL139193.2-201ENST00000553712 DIEXFQ68CQ4 756 aaKnown RBP21.19■□□□□ 0.98
AL139193.2-201ENST00000553712 CUL7Q14999 1698 aa21.15■□□□□ 0.98
AL139193.2-201ENST00000553712 APLP2Q06481 763 aa21.14■□□□□ 0.98
AL139193.2-201ENST00000553712 ARHGAP35Q9NRY4 1499 aa21.13■□□□□ 0.97
AL139193.2-201ENST00000553712 HNRNPUL2Q1KMD3 747 aaKnown RBP21.13■□□□□ 0.97
AL139193.2-201ENST00000553712 ABCA5Q8WWZ7 1642 aa21.1■□□□□ 0.97
AL139193.2-201ENST00000553712 ZNF316A6NFI3 1004 aaPredicted RBP21.08■□□□□ 0.96
AL139193.2-201ENST00000553712 ACIN1Q9UKV3 1341 aaKnown RBP21.05■□□□□ 0.96
AL139193.2-201ENST00000553712 TARBP1Q13395 1621 aaKnown RBP21.05■□□□□ 0.96
AL139193.2-201ENST00000553712 GAPVD1Q14C86 1478 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms