Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTLA4P16410 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CTLA4P16410 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CTLA4P16410 MSNP1-201ENST00000511640 1732 ntBASIC12.45□□□□□ -0.42
CTLA4P16410 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTLA4P16410 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.45□□□□□ -0.42
CTLA4P16410 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTLA4P16410 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.45□□□□□ -0.42
CTLA4P16410 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.45□□□□□ -0.42
CTLA4P16410 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CTLA4P16410 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTLA4P16410 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.45□□□□□ -0.42
CTLA4P16410 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 AL358781.1-202ENST00000321081 1360 ntBASIC12.44□□□□□ -0.42
CTLA4P16410 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CTLA4P16410 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.44□□□□□ -0.42
CTLA4P16410 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CTLA4P16410 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.44□□□□□ -0.42
CTLA4P16410 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
CTLA4P16410 Z98885.3-201ENST00000624882 1757 ntBASIC12.44□□□□□ -0.42
CTLA4P16410 AC004899.2-201ENST00000622993 3860 ntBASIC12.44□□□□□ -0.42
CTLA4P16410 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.44□□□□□ -0.42
CTLA4P16410 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.44□□□□□ -0.42
CTLA4P16410 MIR1908-201ENST00000410394 80 ntBASIC12.44□□□□□ -0.42
CTLA4P16410 AC006987.1-201ENST00000413610 527 ntBASIC12.44□□□□□ -0.42
CTLA4P16410 AC004898.1-201ENST00000451057 766 ntBASIC12.44□□□□□ -0.42
CTLA4P16410 DUX4L50-201ENST00000455245 715 ntBASIC12.44□□□□□ -0.42
CTLA4P16410 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.44□□□□□ -0.42
CTLA4P16410 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.44□□□□□ -0.42
CTLA4P16410 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.44□□□□□ -0.42
CTLA4P16410 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.44□□□□□ -0.42
CTLA4P16410 KRT8P1-201ENST00000557533 1207 ntBASIC12.44□□□□□ -0.42
CTLA4P16410 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.44□□□□□ -0.42
CTLA4P16410 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.44□□□□□ -0.42
CTLA4P16410 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.44□□□□□ -0.42
CTLA4P16410 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 AL139424.3-202ENST00000641619 917 ntBASIC12.44□□□□□ -0.42
CTLA4P16410 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 MKRN5P-201ENST00000445263 1467 ntBASIC12.44□□□□□ -0.42
CTLA4P16410 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.44□□□□□ -0.42
CTLA4P16410 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CTLA4P16410 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.44□□□□□ -0.42
CTLA4P16410 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CTLA4P16410 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTLA4P16410 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.43□□□□□ -0.42
CTLA4P16410 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.43□□□□□ -0.42
CTLA4P16410 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.43□□□□□ -0.42
CTLA4P16410 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 ZNF493-208ENST00000599461 1769 ntBASIC12.43□□□□□ -0.42
CTLA4P16410 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.43□□□□□ -0.42
CTLA4P16410 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.43□□□□□ -0.42
CTLA4P16410 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.43□□□□□ -0.42
CTLA4P16410 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.43□□□□□ -0.42
CTLA4P16410 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms