RNA–Protein interactions for RNA: ENST00000616178.4

CYFIP2-219, Transcript of cytoplasmic FMR1 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene CYFIP2, Length 4,210 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP2-219ENST00000616178 NISCHQ9Y2I1 1504 aa29.66■■■□□ 2.34
CYFIP2-219ENST00000616178 DCAF8L2P0C7V8 631 aa25.73■■□□□ 1.71
CYFIP2-219ENST00000616178 CCDC180Q9P1Z9 1646 aa25.33■■□□□ 1.64
CYFIP2-219ENST00000616178 SHROOM4Q9ULL8 1493 aa25.31■■□□□ 1.64
CYFIP2-219ENST00000616178 ZCCHC6Q5VYS8 1495 aaKnown RBP24.86■■□□□ 1.57
CYFIP2-219ENST00000616178 ABCC9O60706 1549 aa24.68■■□□□ 1.54
CYFIP2-219ENST00000616178 SUPT5HO00267 1087 aaKnown RBP24.59■■□□□ 1.53
CYFIP2-219ENST00000616178 DCAF1Q9Y4B6 1507 aa24.14■■□□□ 1.46
CYFIP2-219ENST00000616178 SCRIBQ14160 1630 aa23.97■■□□□ 1.43
CYFIP2-219ENST00000616178 NACADO15069 1562 aa23.81■■□□□ 1.4
CYFIP2-219ENST00000616178 MYO15BQ96JP2 1530 aa23.7■■□□□ 1.38
CYFIP2-219ENST00000616178 RB1CC1Q8TDY2 1594 aa23.67■■□□□ 1.38
CYFIP2-219ENST00000616178 PABPN1Q86U42 306 aaKnown RBP eCLIP23.63■■□□□ 1.37
CYFIP2-219ENST00000616178 CECR2Q9BXF3 1484 aa23.27■■□□□ 1.32
CYFIP2-219ENST00000616178 RSF1Q96T23 1441 aaPredicted RBP23.27■■□□□ 1.32
CYFIP2-219ENST00000616178 CHIC1Q5VXU3 224 aa23.19■■□□□ 1.3
CYFIP2-219ENST00000616178 MROH2BQ7Z745 1585 aa23.04■■□□□ 1.28
CYFIP2-219ENST00000616178 TRIM41Q8WV44 630 aa22.9■■□□□ 1.26
CYFIP2-219ENST00000616178 BAZ1AQ9NRL2 1556 aaPredicted RBP22.89■■□□□ 1.25
CYFIP2-219ENST00000616178 FAM9AQ8IZU1 332 aaPredicted RBP22.84■■□□□ 1.25
CYFIP2-219ENST00000616178 EHMT2Q96KQ7 1210 aa22.82■■□□□ 1.24
CYFIP2-219ENST00000616178 UNC13AQ9UPW8 1703 aa22.82■■□□□ 1.24
CYFIP2-219ENST00000616178 WIZO95785 1651 aa22.81■■□□□ 1.24
CYFIP2-219ENST00000616178 BICRAQ9NZM4 1560 aa22.77■■□□□ 1.24
CYFIP2-219ENST00000616178 SMARCA4P51532 1647 aa22.68■■□□□ 1.22
CYFIP2-219ENST00000616178 LOC105371045A0A1W2PR82 267 aa22.62■■□□□ 1.21
CYFIP2-219ENST00000616178 TOP2AP11388 1531 aaKnown RBP22.48■■□□□ 1.19
CYFIP2-219ENST00000616178 CCDC88BA6NC98 1476 aa22.47■■□□□ 1.19
CYFIP2-219ENST00000616178 BAZ1BQ9UIG0 1483 aaKnown RBP22.46■■□□□ 1.19
CYFIP2-219ENST00000616178 ATAD2BQ9ULI0 1458 aa22.42■■□□□ 1.18
CYFIP2-219ENST00000616178 SMARCA2P51531 1590 aa22.32■■□□□ 1.16
CYFIP2-219ENST00000616178 EIF4G1Q04637 1599 aaKnown RBP22.27■■□□□ 1.16
CYFIP2-219ENST00000616178 ABCC8Q09428 1581 aa22.18■■□□□ 1.14
CYFIP2-219ENST00000616178 PEG3Q9GZU2 1588 aa22.09■■□□□ 1.13
CYFIP2-219ENST00000616178 NCAPD3P42695 1498 aa22.08■■□□□ 1.12
CYFIP2-219ENST00000616178 UBTFP17480 764 aaKnown RBP22.06■■□□□ 1.12
CYFIP2-219ENST00000616178 WRNQ14191 1432 aaPredicted RBP eCLIP22.04■■□□□ 1.12
CYFIP2-219ENST00000616178 RANGAP1P46060 587 aaPredicted RBP22■■□□□ 1.11
CYFIP2-219ENST00000616178 PCGF6Q9BYE7 350 aa21.98■■□□□ 1.11
CYFIP2-219ENST00000616178 CSRNP3Q8WYN3 585 aa21.93■■□□□ 1.1
CYFIP2-219ENST00000616178 CC2D2AQ9P2K1 1620 aa21.92■■□□□ 1.1
CYFIP2-219ENST00000616178 SOGA1O94964 1423 aa21.91■■□□□ 1.1
CYFIP2-219ENST00000616178 HMGXB3Q12766 1538 aa21.9■■□□□ 1.1
CYFIP2-219ENST00000616178 PPARGC1BQ86YN6 1023 aaKnown RBP21.88■■□□□ 1.09
CYFIP2-219ENST00000616178 TTBK1Q5TCY1 1321 aaPredicted RBP21.86■■□□□ 1.09
CYFIP2-219ENST00000616178 DNAJC5BQ9UF47 199 aa21.78■■□□□ 1.08
CYFIP2-219ENST00000616178 CADPSQ9ULU8 1353 aa21.78■■□□□ 1.08
CYFIP2-219ENST00000616178 RUSC2Q8N2Y8 1516 aa21.76■■□□□ 1.07
CYFIP2-219ENST00000616178 CFTRP13569 1480 aa21.69■■□□□ 1.06
CYFIP2-219ENST00000616178 SYNJ1O43426 1573 aa21.68■■□□□ 1.06
CYFIP2-219ENST00000616178 EEA1Q15075 1411 aa21.65■■□□□ 1.06
CYFIP2-219ENST00000616178 NESP48681 1621 aa21.59■■□□□ 1.05
CYFIP2-219ENST00000616178 TRIM26Q12899 539 aaPredicted RBP21.59■■□□□ 1.05
CYFIP2-219ENST00000616178 FANCD2Q9BXW9 1451 aa21.54■■□□□ 1.04
CYFIP2-219ENST00000616178 APLP2Q06481 763 aa21.53■■□□□ 1.04
CYFIP2-219ENST00000616178 GOLGA3Q08378 1498 aa21.52■■□□□ 1.04
CYFIP2-219ENST00000616178 CEP162Q5TB80 1403 aa21.5■■□□□ 1.03
CYFIP2-219ENST00000616178 CUX1P39880 1505 aa21.49■■□□□ 1.03
CYFIP2-219ENST00000616178 KIF27Q86VH2 1401 aa21.48■■□□□ 1.03
CYFIP2-219ENST00000616178 TNIKQ9UKE5 1360 aa21.47■■□□□ 1.03
CYFIP2-219ENST00000616178 CEP164Q9UPV0 1460 aa21.46■■□□□ 1.03
CYFIP2-219ENST00000616178 CUX2O14529 1486 aa21.45■■□□□ 1.02
CYFIP2-219ENST00000616178 TOP2BQ02880 1626 aa21.45■■□□□ 1.02
CYFIP2-219ENST00000616178 PDS5BQ9NTI5 1447 aa21.4■■□□□ 1.02
CYFIP2-219ENST00000616178 RAPGEF2Q9Y4G8 1499 aa21.38■■□□□ 1.01
CYFIP2-219ENST00000616178 FGD5Q6ZNL6 1462 aa21.37■■□□□ 1.01
CYFIP2-219ENST00000616178 ATP1B4Q9UN42 357 aaPredicted RBP21.36■■□□□ 1.01
CYFIP2-219ENST00000616178 CLIP1P30622 1438 aa21.34■■□□□ 1.01
CYFIP2-219ENST00000616178 RAD54L2Q9Y4B4 1467 aa21.3■■□□□ 1
CYFIP2-219ENST00000616178 P3H3Q8IVL6 736 aa21.28■■□□□ 1
CYFIP2-219ENST00000616178 TDRD9Q8NDG6 1382 aaKnown RBP21.26■□□□□ 0.99
CYFIP2-219ENST00000616178 BIVM-ERCC5R4GMW8 1640 aa21.26■□□□□ 0.99
CYFIP2-219ENST00000616178 CARMIL1Q5VZK9 1371 aa21.24■□□□□ 0.99
CYFIP2-219ENST00000616178 TOPBP1Q92547 1522 aa21.22■□□□□ 0.99
CYFIP2-219ENST00000616178 ERCC6Q03468 1493 aa21.22■□□□□ 0.99
CYFIP2-219ENST00000616178 LAMC3Q9Y6N6 1575 aa21.21■□□□□ 0.99
CYFIP2-219ENST00000616178 IGF1RP08069 1367 aa21.21■□□□□ 0.99
CYFIP2-219ENST00000616178 HRCP23327 699 aa21.2■□□□□ 0.98
CYFIP2-219ENST00000616178 POLA1P09884 1462 aaPredicted RBP21.17■□□□□ 0.98
CYFIP2-219ENST00000616178 KIF21BO75037 1637 aa21.15■□□□□ 0.98
CYFIP2-219ENST00000616178 DNMBPQ6XZF7 1577 aa21.14■□□□□ 0.97
CYFIP2-219ENST00000616178 URB2Q14146 1524 aaKnown RBP21.12■□□□□ 0.97
CYFIP2-219ENST00000616178 PRXQ9BXM0 1461 aa21.12■□□□□ 0.97
CYFIP2-219ENST00000616178 FBLN2P98095 1184 aa21.11■□□□□ 0.97
CYFIP2-219ENST00000616178 HNRNPUL2Q1KMD3 747 aaKnown RBP21.09■□□□□ 0.97
CYFIP2-219ENST00000616178 PRDM2Q13029 1718 aa21.06■□□□□ 0.96
CYFIP2-219ENST00000616178 CCER1Q8TC90 406 aaPredicted RBP21.04■□□□□ 0.96
CYFIP2-219ENST00000616178 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.02■□□□□ 0.96
CYFIP2-219ENST00000616178 VPS8Q8N3P4 1428 aa21.02■□□□□ 0.96
CYFIP2-219ENST00000616178 ERICH3Q5RHP9 1530 aa20.99■□□□□ 0.95
CYFIP2-219ENST00000616178 ABCA10Q8WWZ4 1543 aa20.98■□□□□ 0.95
CYFIP2-219ENST00000616178 MRC2Q9UBG0 1479 aa20.98■□□□□ 0.95
CYFIP2-219ENST00000616178 GAPVD1Q14C86 1478 aa20.98■□□□□ 0.95
CYFIP2-219ENST00000616178 AQRO60306 1485 aaKnown RBP eCLIP20.97■□□□□ 0.95
CYFIP2-219ENST00000616178 ITGAEP38570 1179 aa20.96■□□□□ 0.95
CYFIP2-219ENST00000616178 KIF21AQ7Z4S6 1674 aa20.95■□□□□ 0.94
CYFIP2-219ENST00000616178 ARID3CA6NKF2 412 aa20.9■□□□□ 0.94
CYFIP2-219ENST00000616178 CHMP7Q8WUX9 453 aaPredicted RBP20.89■□□□□ 0.93
CYFIP2-219ENST00000616178 KANK4Q5T7N3 995 aaPredicted RBP20.87■□□□□ 0.93
CYFIP2-219ENST00000616178 ARAP1Q96P48 1450 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms