Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFT52Q9Y366 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFT52Q9Y366 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFT52Q9Y366 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.22□□□□□ -0.29
IFT52Q9Y366 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.22□□□□□ -0.29
IFT52Q9Y366 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFT52Q9Y366 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFT52Q9Y366 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFT52Q9Y366 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFT52Q9Y366 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
IFT52Q9Y366 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFT52Q9Y366 SHMT1P1-201ENST00000419974 1312 ntBASIC13.22□□□□□ -0.29
IFT52Q9Y366 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
IFT52Q9Y366 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IFT52Q9Y366 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IFT52Q9Y366 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFT52Q9Y366 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.22□□□□□ -0.29
IFT52Q9Y366 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.22□□□□□ -0.29
IFT52Q9Y366 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFT52Q9Y366 AL391647.1-201ENST00000395664 511 ntBASIC13.22□□□□□ -0.29
IFT52Q9Y366 AL035633.1-201ENST00000406139 838 ntBASIC13.22□□□□□ -0.29
IFT52Q9Y366 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.22□□□□□ -0.29
IFT52Q9Y366 GAPDHP21-201ENST00000450301 1010 ntBASIC13.22□□□□□ -0.29
IFT52Q9Y366 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.22□□□□□ -0.29
IFT52Q9Y366 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.22□□□□□ -0.29
IFT52Q9Y366 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.22□□□□□ -0.29
IFT52Q9Y366 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.22□□□□□ -0.29
IFT52Q9Y366 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.22□□□□□ -0.29
IFT52Q9Y366 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.22□□□□□ -0.29
IFT52Q9Y366 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.22□□□□□ -0.29
IFT52Q9Y366 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.22□□□□□ -0.29
IFT52Q9Y366 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFT52Q9Y366 AP000346.4-201ENST00000614827 381 ntBASIC13.22□□□□□ -0.29
IFT52Q9Y366 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFT52Q9Y366 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFT52Q9Y366 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFT52Q9Y366 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFT52Q9Y366 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC13.22□□□□□ -0.29
IFT52Q9Y366 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFT52Q9Y366 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
IFT52Q9Y366 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.22□□□□□ -0.29
IFT52Q9Y366 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFT52Q9Y366 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFT52Q9Y366 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
IFT52Q9Y366 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IFT52Q9Y366 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFT52Q9Y366 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
IFT52Q9Y366 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.22□□□□□ -0.29
IFT52Q9Y366 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
IFT52Q9Y366 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IFT52Q9Y366 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
IFT52Q9Y366 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IFT52Q9Y366 PCDHB17P-202ENST00000623466 3066 ntBASIC13.21□□□□□ -0.29
IFT52Q9Y366 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
IFT52Q9Y366 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.21□□□□□ -0.29
IFT52Q9Y366 AC102953.2-201ENST00000609755 3026 ntBASIC13.21□□□□□ -0.29
IFT52Q9Y366 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
IFT52Q9Y366 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IFT52Q9Y366 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
IFT52Q9Y366 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
IFT52Q9Y366 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IFT52Q9Y366 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.21□□□□□ -0.29
IFT52Q9Y366 AL445209.1-201ENST00000607269 3491 ntBASIC13.21□□□□□ -0.29
IFT52Q9Y366 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IFT52Q9Y366 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IFT52Q9Y366 AC009474.1-201ENST00000455096 1565 ntBASIC13.21□□□□□ -0.29
IFT52Q9Y366 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
IFT52Q9Y366 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IFT52Q9Y366 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
IFT52Q9Y366 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IFT52Q9Y366 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IFT52Q9Y366 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IFT52Q9Y366 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
IFT52Q9Y366 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.21□□□□□ -0.29
IFT52Q9Y366 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.21□□□□□ -0.29
IFT52Q9Y366 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.21□□□□□ -0.29
IFT52Q9Y366 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.21□□□□□ -0.29
IFT52Q9Y366 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.21□□□□□ -0.29
IFT52Q9Y366 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
IFT52Q9Y366 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
IFT52Q9Y366 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
IFT52Q9Y366 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
IFT52Q9Y366 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.21□□□□□ -0.29
IFT52Q9Y366 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IFT52Q9Y366 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IFT52Q9Y366 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
IFT52Q9Y366 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IFT52Q9Y366 MARK2P9-201ENST00000430958 1727 ntBASIC13.21□□□□□ -0.3
IFT52Q9Y366 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.21□□□□□ -0.3
IFT52Q9Y366 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
IFT52Q9Y366 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
IFT52Q9Y366 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
IFT52Q9Y366 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
IFT52Q9Y366 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.21□□□□□ -0.3
IFT52Q9Y366 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
IFT52Q9Y366 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
IFT52Q9Y366 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
IFT52Q9Y366 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
IFT52Q9Y366 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms