RNA–Protein interactions for RNA: ENST00000614827.1

AP000346.4-201, humanhuman

BASIC

Gene AP000346.4, Length 381 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000346.4-201ENST00000614827 NISCHQ9Y2I1 1504 aa35.8■■■■□ 3.32
AP000346.4-201ENST00000614827 ABCC9O60706 1549 aa32.23■■■□□ 2.75
AP000346.4-201ENST00000614827 CCDC180Q9P1Z9 1646 aa32.2■■■□□ 2.75
AP000346.4-201ENST00000614827 RB1CC1Q8TDY2 1594 aa30.62■■■□□ 2.49
AP000346.4-201ENST00000614827 NACADO15069 1562 aa30.39■■■□□ 2.46
AP000346.4-201ENST00000614827 DNAJC5BQ9UF47 199 aa30.31■■■□□ 2.44
AP000346.4-201ENST00000614827 DCAF8L2P0C7V8 631 aa30.12■■■□□ 2.41
AP000346.4-201ENST00000614827 UNC13AQ9UPW8 1703 aa30.12■■■□□ 2.41
AP000346.4-201ENST00000614827 PABPN1Q86U42 306 aaKnown RBP eCLIP29.95■■■□□ 2.39
AP000346.4-201ENST00000614827 MYO15BQ96JP2 1530 aa29.93■■■□□ 2.38
AP000346.4-201ENST00000614827 BICRAQ9NZM4 1560 aa29.85■■■□□ 2.37
AP000346.4-201ENST00000614827 ZCCHC6Q5VYS8 1495 aaKnown RBP29.68■■■□□ 2.34
AP000346.4-201ENST00000614827 DCAF1Q9Y4B6 1507 aa29.55■■■□□ 2.32
AP000346.4-201ENST00000614827 SCRIBQ14160 1630 aa29.35■■■□□ 2.29
AP000346.4-201ENST00000614827 SHROOM4Q9ULL8 1493 aa29.29■■■□□ 2.28
AP000346.4-201ENST00000614827 CC2D2AQ9P2K1 1620 aa29.15■■■□□ 2.26
AP000346.4-201ENST00000614827 EIF4G1Q04637 1599 aaKnown RBP29.06■■■□□ 2.24
AP000346.4-201ENST00000614827 CECR2Q9BXF3 1484 aa29.01■■■□□ 2.23
AP000346.4-201ENST00000614827 NCAPD3P42695 1498 aa28.04■■■□□ 2.08
AP000346.4-201ENST00000614827 SMARCA4P51532 1647 aa27.99■■■□□ 2.07
AP000346.4-201ENST00000614827 ATAD2BQ9ULI0 1458 aa27.98■■■□□ 2.07
AP000346.4-201ENST00000614827 HMGXB3Q12766 1538 aa27.87■■■□□ 2.05
AP000346.4-201ENST00000614827 SMARCA2P51531 1590 aa27.87■■■□□ 2.05
AP000346.4-201ENST00000614827 DNAJC5Q9H3Z4 198 aa27.79■■■□□ 2.04
AP000346.4-201ENST00000614827 BAZ1AQ9NRL2 1556 aaPredicted RBP27.77■■■□□ 2.04
AP000346.4-201ENST00000614827 CUX2O14529 1486 aa27.76■■■□□ 2.04
AP000346.4-201ENST00000614827 ERCC6Q03468 1493 aa27.76■■■□□ 2.04
AP000346.4-201ENST00000614827 NESP48681 1621 aa27.71■■■□□ 2.03
AP000346.4-201ENST00000614827 PEG3Q9GZU2 1588 aa27.7■■■□□ 2.03
AP000346.4-201ENST00000614827 BAZ1BQ9UIG0 1483 aaKnown RBP27.68■■■□□ 2.02
AP000346.4-201ENST00000614827 MROH2BQ7Z745 1585 aa27.62■■■□□ 2.01
AP000346.4-201ENST00000614827 THOC2Q8NI27 1593 aaKnown RBP27.48■■□□□ 1.99
AP000346.4-201ENST00000614827 LAMC3Q9Y6N6 1575 aa27.46■■□□□ 1.99
AP000346.4-201ENST00000614827 KIF21AQ7Z4S6 1674 aa27.41■■□□□ 1.98
AP000346.4-201ENST00000614827 WIZO95785 1651 aa27.33■■□□□ 1.97
AP000346.4-201ENST00000614827 PDS5BQ9NTI5 1447 aa27.22■■□□□ 1.95
AP000346.4-201ENST00000614827 CADPSQ9ULU8 1353 aa27.17■■□□□ 1.94
AP000346.4-201ENST00000614827 MRC2Q9UBG0 1479 aa27.06■■□□□ 1.92
AP000346.4-201ENST00000614827 WDR62O43379 1518 aa27.04■■□□□ 1.92
AP000346.4-201ENST00000614827 RSF1Q96T23 1441 aaPredicted RBP27■■□□□ 1.91
AP000346.4-201ENST00000614827 CEP164Q9UPV0 1460 aa26.93■■□□□ 1.9
AP000346.4-201ENST00000614827 TOP2AP11388 1531 aaKnown RBP26.91■■□□□ 1.9
AP000346.4-201ENST00000614827 FANCD2Q9BXW9 1451 aa26.9■■□□□ 1.9
AP000346.4-201ENST00000614827 CFTRP13569 1480 aa26.88■■□□□ 1.89
AP000346.4-201ENST00000614827 PRDM2Q13029 1718 aa26.73■■□□□ 1.87
AP000346.4-201ENST00000614827 URB2Q14146 1524 aaKnown RBP26.73■■□□□ 1.87
AP000346.4-201ENST00000614827 CCDC88BA6NC98 1476 aa26.6■■□□□ 1.85
AP000346.4-201ENST00000614827 TRIM41Q8WV44 630 aa26.55■■□□□ 1.84
AP000346.4-201ENST00000614827 ZNF608Q9ULD9 1512 aaPredicted RBP26.41■■□□□ 1.82
AP000346.4-201ENST00000614827 TOPBP1Q92547 1522 aa26.4■■□□□ 1.82
AP000346.4-201ENST00000614827 OSCARQ8IYS5 282 aa26.4■■□□□ 1.82
AP000346.4-201ENST00000614827 IFT140Q96RY7 1462 aa26.36■■□□□ 1.81
AP000346.4-201ENST00000614827 DNMBPQ6XZF7 1577 aa26.31■■□□□ 1.8
AP000346.4-201ENST00000614827 EIF4G3O43432 1585 aaKnown RBP26.29■■□□□ 1.8
AP000346.4-201ENST00000614827 RIMBP3CA6NJZ7 1639 aa26.25■■□□□ 1.79
AP000346.4-201ENST00000614827 RIMBP3BA6NNM3 1639 aa26.25■■□□□ 1.79
AP000346.4-201ENST00000614827 RIMBP3Q9UFD9 1639 aa26.25■■□□□ 1.79
AP000346.4-201ENST00000614827 ABCC8Q09428 1581 aa26.24■■□□□ 1.79
AP000346.4-201ENST00000614827 TARBP1Q13395 1621 aaKnown RBP26.23■■□□□ 1.79
AP000346.4-201ENST00000614827 CHD1O14646 1710 aa26.15■■□□□ 1.78
AP000346.4-201ENST00000614827 SUPT5HO00267 1087 aaKnown RBP26.15■■□□□ 1.78
AP000346.4-201ENST00000614827 POLA1P09884 1462 aaPredicted RBP26.13■■□□□ 1.77
AP000346.4-201ENST00000614827 AQRO60306 1485 aaKnown RBP eCLIP26.12■■□□□ 1.77
AP000346.4-201ENST00000614827 ARHGEF11O15085 1522 aa26.12■■□□□ 1.77
AP000346.4-201ENST00000614827 RAD54L2Q9Y4B4 1467 aa26.04■■□□□ 1.76
AP000346.4-201ENST00000614827 CUX1P39880 1505 aa25.96■■□□□ 1.75
AP000346.4-201ENST00000614827 FGD5Q6ZNL6 1462 aa25.96■■□□□ 1.75
AP000346.4-201ENST00000614827 SOGA1O94964 1423 aa25.95■■□□□ 1.74
AP000346.4-201ENST00000614827 TDRD9Q8NDG6 1382 aaKnown RBP25.93■■□□□ 1.74
AP000346.4-201ENST00000614827 WDR97A6NE52 1622 aa25.88■■□□□ 1.73
AP000346.4-201ENST00000614827 SNAPC4Q5SXM2 1469 aa25.87■■□□□ 1.73
AP000346.4-201ENST00000614827 ARAP1Q96P48 1450 aa25.86■■□□□ 1.73
AP000346.4-201ENST00000614827 FBLN2P98095 1184 aa25.86■■□□□ 1.73
AP000346.4-201ENST00000614827 CYB5RLQ6IPT4 315 aa25.82■■□□□ 1.72
AP000346.4-201ENST00000614827 CLASP1Q7Z460 1538 aa25.8■■□□□ 1.72
AP000346.4-201ENST00000614827 PBRM1Q86U86 1689 aa25.78■■□□□ 1.72
AP000346.4-201ENST00000614827 MAGI1Q96QZ7 1491 aaPredicted RBP25.75■■□□□ 1.71
AP000346.4-201ENST00000614827 GRIN2BQ13224 1484 aa25.74■■□□□ 1.71
AP000346.4-201ENST00000614827 SYNJ1O43426 1573 aa25.71■■□□□ 1.71
AP000346.4-201ENST00000614827 SYNJ2O15056 1496 aa25.68■■□□□ 1.7
AP000346.4-201ENST00000614827 ABCA5Q8WWZ7 1642 aa25.68■■□□□ 1.7
AP000346.4-201ENST00000614827 GAPVD1Q14C86 1478 aa25.66■■□□□ 1.7
AP000346.4-201ENST00000614827 CHMP7Q8WUX9 453 aaPredicted RBP25.65■■□□□ 1.7
AP000346.4-201ENST00000614827 ABCA10Q8WWZ4 1543 aa25.64■■□□□ 1.7
AP000346.4-201ENST00000614827 BIVM-ERCC5R4GMW8 1640 aa25.55■■□□□ 1.68
AP000346.4-201ENST00000614827 TRHP20396 242 aaPredicted RBP25.53■■□□□ 1.68
AP000346.4-201ENST00000614827 TOP2BQ02880 1626 aa25.51■■□□□ 1.67
AP000346.4-201ENST00000614827 ADAMTS12P58397 1594 aa25.48■■□□□ 1.67
AP000346.4-201ENST00000614827 WRNQ14191 1432 aaPredicted RBP eCLIP25.46■■□□□ 1.67
AP000346.4-201ENST00000614827 GRIN2AQ12879 1464 aa25.45■■□□□ 1.66
AP000346.4-201ENST00000614827 ERCC6L2Q5T890 1561 aa25.44■■□□□ 1.66
AP000346.4-201ENST00000614827 CEP170Q5SW79 1584 aa25.43■■□□□ 1.66
AP000346.4-201ENST00000614827 NUP160Q12769 1436 aa25.37■■□□□ 1.65
AP000346.4-201ENST00000614827 SHROOM2Q13796 1616 aa25.33■■□□□ 1.65
AP000346.4-201ENST00000614827 ERICH3Q5RHP9 1530 aa25.31■■□□□ 1.64
AP000346.4-201ENST00000614827 FHAD1B1AJZ9 1412 aa25.3■■□□□ 1.64
AP000346.4-201ENST00000614827 RUSC2Q8N2Y8 1516 aa25.13■■□□□ 1.61
AP000346.4-201ENST00000614827 PRG4Q92954 1404 aaPredicted RBP25.09■■□□□ 1.61
AP000346.4-201ENST00000614827 KIF13AQ9H1H9 1805 aa25.07■■□□□ 1.6
AP000346.4-201ENST00000614827 JPH4Q96JJ6 628 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms