RNA–Protein interactions for RNA: ENST00000329697.10

ACSM2B-201, Transcript of acyl-CoA synthetase medium chain family member 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACSM2B, Length 2,935 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM2B-201ENST00000329697 NISCHQ9Y2I1 1504 aa27.52■■■□□ 2
ACSM2B-201ENST00000329697 CCDC180Q9P1Z9 1646 aa23.87■■□□□ 1.41
ACSM2B-201ENST00000329697 ZCCHC6Q5VYS8 1495 aaKnown RBP23.18■■□□□ 1.3
ACSM2B-201ENST00000329697 DCAF1Q9Y4B6 1507 aa22.75■■□□□ 1.23
ACSM2B-201ENST00000329697 SHROOM4Q9ULL8 1493 aa22.59■■□□□ 1.21
ACSM2B-201ENST00000329697 DCAF8L2P0C7V8 631 aa22.55■■□□□ 1.2
ACSM2B-201ENST00000329697 MYO15BQ96JP2 1530 aa22.38■■□□□ 1.17
ACSM2B-201ENST00000329697 ABCC9O60706 1549 aa22.38■■□□□ 1.17
ACSM2B-201ENST00000329697 NACADO15069 1562 aa22.17■■□□□ 1.14
ACSM2B-201ENST00000329697 PELP1Q8IZL8 1130 aaKnown RBP22.03■■□□□ 1.12
ACSM2B-201ENST00000329697 SCRIBQ14160 1630 aa22.01■■□□□ 1.11
ACSM2B-201ENST00000329697 RB1CC1Q8TDY2 1594 aa21.92■■□□□ 1.1
ACSM2B-201ENST00000329697 SUPT5HO00267 1087 aaKnown RBP21.8■■□□□ 1.08
ACSM2B-201ENST00000329697 HRCP23327 699 aa21.68■■□□□ 1.06
ACSM2B-201ENST00000329697 UNC13AQ9UPW8 1703 aa21.56■■□□□ 1.04
ACSM2B-201ENST00000329697 RSF1Q96T23 1441 aaPredicted RBP21.44■■□□□ 1.02
ACSM2B-201ENST00000329697 CECR2Q9BXF3 1484 aa21.39■■□□□ 1.02
ACSM2B-201ENST00000329697 MYT1Q01538 1121 aa21.39■■□□□ 1.01
ACSM2B-201ENST00000329697 BICRAQ9NZM4 1560 aa21.34■■□□□ 1.01
ACSM2B-201ENST00000329697 PPARGC1BQ86YN6 1023 aaKnown RBP21.3■■□□□ 1
ACSM2B-201ENST00000329697 MROH2BQ7Z745 1585 aa21.29■■□□□ 1
ACSM2B-201ENST00000329697 BAZ1AQ9NRL2 1556 aaPredicted RBP21.2■□□□□ 0.98
ACSM2B-201ENST00000329697 PABPN1Q86U42 306 aaKnown RBP eCLIP21.15■□□□□ 0.98
ACSM2B-201ENST00000329697 WIZO95785 1651 aa21.13■□□□□ 0.97
ACSM2B-201ENST00000329697 SMARCA4P51532 1647 aa21.11■□□□□ 0.97
ACSM2B-201ENST00000329697 CHIC1Q5VXU3 224 aa21.02■□□□□ 0.96
ACSM2B-201ENST00000329697 PCGF6Q9BYE7 350 aa20.98■□□□□ 0.95
ACSM2B-201ENST00000329697 SCAF1Q9H7N4 1312 aaKnown RBP20.97■□□□□ 0.95
ACSM2B-201ENST00000329697 TOP2AP11388 1531 aaKnown RBP20.89■□□□□ 0.93
ACSM2B-201ENST00000329697 PEG3Q9GZU2 1588 aa20.85■□□□□ 0.93
ACSM2B-201ENST00000329697 SMARCA2P51531 1590 aa20.72■□□□□ 0.91
ACSM2B-201ENST00000329697 ATAD2BQ9ULI0 1458 aa20.7■□□□□ 0.9
ACSM2B-201ENST00000329697 EIF4G1Q04637 1599 aaKnown RBP20.7■□□□□ 0.9
ACSM2B-201ENST00000329697 CCDC88BA6NC98 1476 aa20.69■□□□□ 0.9
ACSM2B-201ENST00000329697 BAZ1BQ9UIG0 1483 aaKnown RBP20.57■□□□□ 0.88
ACSM2B-201ENST00000329697 NCAPD3P42695 1498 aa20.48■□□□□ 0.87
ACSM2B-201ENST00000329697 HMGXB3Q12766 1538 aa20.47■□□□□ 0.87
ACSM2B-201ENST00000329697 TRIM41Q8WV44 630 aa20.46■□□□□ 0.87
ACSM2B-201ENST00000329697 ABCC8Q09428 1581 aa20.34■□□□□ 0.85
ACSM2B-201ENST00000329697 CC2D2AQ9P2K1 1620 aa20.27■□□□□ 0.84
ACSM2B-201ENST00000329697 TTBK1Q5TCY1 1321 aaPredicted RBP20.25■□□□□ 0.83
ACSM2B-201ENST00000329697 LOC105371045A0A1W2PR82 267 aa20.23■□□□□ 0.83
ACSM2B-201ENST00000329697 ACIN1Q9UKV3 1341 aaKnown RBP20.21■□□□□ 0.83
ACSM2B-201ENST00000329697 NEUROD1Q13562 356 aa20.15■□□□□ 0.82
ACSM2B-201ENST00000329697 GTF3C3Q9Y5Q9 886 aa20.15■□□□□ 0.82
ACSM2B-201ENST00000329697 WRNQ14191 1432 aaPredicted RBP eCLIP20.14■□□□□ 0.81
ACSM2B-201ENST00000329697 FAM9AQ8IZU1 332 aaPredicted RBP20.11■□□□□ 0.81
ACSM2B-201ENST00000329697 SYNJ1O43426 1573 aa20.1■□□□□ 0.81
ACSM2B-201ENST00000329697 CFTRP13569 1480 aa20.09■□□□□ 0.81
ACSM2B-201ENST00000329697 ZEB1P37275 1124 aaPredicted RBP20.06■□□□□ 0.8
ACSM2B-201ENST00000329697 BCL11AQ9H165 835 aa20.01■□□□□ 0.79
ACSM2B-201ENST00000329697 SOGA1O94964 1423 aa20■□□□□ 0.79
ACSM2B-201ENST00000329697 PRDM2Q13029 1718 aa20■□□□□ 0.79
ACSM2B-201ENST00000329697 TRIM26Q12899 539 aaPredicted RBP19.99■□□□□ 0.79
ACSM2B-201ENST00000329697 TOP2BQ02880 1626 aa19.98■□□□□ 0.79
ACSM2B-201ENST00000329697 BIVM-ERCC5R4GMW8 1640 aa19.96■□□□□ 0.79
ACSM2B-201ENST00000329697 CADPSQ9ULU8 1353 aa19.95■□□□□ 0.78
ACSM2B-201ENST00000329697 EEA1Q15075 1411 aa19.93■□□□□ 0.78
ACSM2B-201ENST00000329697 RUSC2Q8N2Y8 1516 aa19.93■□□□□ 0.78
ACSM2B-201ENST00000329697 CENPBP07199 599 aaPredicted RBP19.91■□□□□ 0.78
ACSM2B-201ENST00000329697 CUX1P39880 1505 aa19.89■□□□□ 0.77
ACSM2B-201ENST00000329697 EHMT2Q96KQ7 1210 aa19.82■□□□□ 0.76
ACSM2B-201ENST00000329697 CSRNP3Q8WYN3 585 aa19.81■□□□□ 0.76
ACSM2B-201ENST00000329697 PRKCSHP14314 528 aaPredicted RBP19.78■□□□□ 0.76
ACSM2B-201ENST00000329697 DNAJC5BQ9UF47 199 aa19.75■□□□□ 0.75
ACSM2B-201ENST00000329697 NESP48681 1621 aa19.75■□□□□ 0.75
ACSM2B-201ENST00000329697 FANCD2Q9BXW9 1451 aa19.74■□□□□ 0.75
ACSM2B-201ENST00000329697 LAMC3Q9Y6N6 1575 aa19.73■□□□□ 0.75
ACSM2B-201ENST00000329697 KIF21BO75037 1637 aa19.72■□□□□ 0.75
ACSM2B-201ENST00000329697 GOLGA3Q08378 1498 aa19.7■□□□□ 0.74
ACSM2B-201ENST00000329697 TNIKQ9UKE5 1360 aa19.68■□□□□ 0.74
ACSM2B-201ENST00000329697 CEP164Q9UPV0 1460 aa19.67■□□□□ 0.74
ACSM2B-201ENST00000329697 DNMBPQ6XZF7 1577 aa19.61■□□□□ 0.73
ACSM2B-201ENST00000329697 FGD5Q6ZNL6 1462 aa19.61■□□□□ 0.73
ACSM2B-201ENST00000329697 CEP162Q5TB80 1403 aa19.6■□□□□ 0.73
ACSM2B-201ENST00000329697 KIF27Q86VH2 1401 aa19.59■□□□□ 0.73
ACSM2B-201ENST00000329697 RAPGEF2Q9Y4G8 1499 aa19.58■□□□□ 0.72
ACSM2B-201ENST00000329697 PRXQ9BXM0 1461 aa19.57■□□□□ 0.72
ACSM2B-201ENST00000329697 TOPBP1Q92547 1522 aa19.57■□□□□ 0.72
ACSM2B-201ENST00000329697 UBTFP17480 764 aaKnown RBP19.54■□□□□ 0.72
ACSM2B-201ENST00000329697 ERICH3Q5RHP9 1530 aa19.54■□□□□ 0.72
ACSM2B-201ENST00000329697 PDS5BQ9NTI5 1447 aa19.54■□□□□ 0.72
ACSM2B-201ENST00000329697 URB2Q14146 1524 aaKnown RBP19.52■□□□□ 0.72
ACSM2B-201ENST00000329697 CUX2O14529 1486 aa19.51■□□□□ 0.71
ACSM2B-201ENST00000329697 KIF21AQ7Z4S6 1674 aa19.51■□□□□ 0.71
ACSM2B-201ENST00000329697 POLA1P09884 1462 aaPredicted RBP19.5■□□□□ 0.71
ACSM2B-201ENST00000329697 DIEXFQ68CQ4 756 aaKnown RBP19.49■□□□□ 0.71
ACSM2B-201ENST00000329697 ANP32EQ9BTT0 268 aa19.48■□□□□ 0.71
ACSM2B-201ENST00000329697 ABCA10Q8WWZ4 1543 aa19.45■□□□□ 0.7
ACSM2B-201ENST00000329697 RAD54L2Q9Y4B4 1467 aa19.44■□□□□ 0.7
ACSM2B-201ENST00000329697 IGF1RP08069 1367 aa19.43■□□□□ 0.7
ACSM2B-201ENST00000329697 WDR97A6NE52 1622 aa19.4■□□□□ 0.7
ACSM2B-201ENST00000329697 CLIP1P30622 1438 aa19.39■□□□□ 0.69
ACSM2B-201ENST00000329697 YTHDC1Q96MU7 727 aaKnown RBP19.38■□□□□ 0.69
ACSM2B-201ENST00000329697 MRC2Q9UBG0 1479 aa19.31■□□□□ 0.68
ACSM2B-201ENST00000329697 CARMIL1Q5VZK9 1371 aa19.3■□□□□ 0.68
ACSM2B-201ENST00000329697 ABCA5Q8WWZ7 1642 aa19.3■□□□□ 0.68
ACSM2B-201ENST00000329697 ERICH6Q7L0X2 663 aa19.29■□□□□ 0.68
ACSM2B-201ENST00000329697 TARBP1Q13395 1621 aaKnown RBP19.29■□□□□ 0.68
ACSM2B-201ENST00000329697 VPS8Q8N3P4 1428 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms