Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.24□□□□□ -0.13
SEMA3CQ99985 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SEMA3CQ99985 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.24□□□□□ -0.13
SEMA3CQ99985 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC14.24□□□□□ -0.13
SEMA3CQ99985 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA3CQ99985 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
SEMA3CQ99985 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA3CQ99985 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SEMA3CQ99985 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.24□□□□□ -0.13
SEMA3CQ99985 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SEMA3CQ99985 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.24□□□□□ -0.13
SEMA3CQ99985 SIGLEC18P-201ENST00000602271 909 ntBASIC14.24□□□□□ -0.13
SEMA3CQ99985 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.24□□□□□ -0.13
SEMA3CQ99985 AC006453.1-201ENST00000636037 1257 ntBASIC14.24□□□□□ -0.13
SEMA3CQ99985 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA3CQ99985 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA3CQ99985 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SEMA3CQ99985 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.24□□□□□ -0.13
SEMA3CQ99985 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.24□□□□□ -0.13
SEMA3CQ99985 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA3CQ99985 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA3CQ99985 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA3CQ99985 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA3CQ99985 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA3CQ99985 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA3CQ99985 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SEMA3CQ99985 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA3CQ99985 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SEMA3CQ99985 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA3CQ99985 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.23□□□□□ -0.13
SEMA3CQ99985 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.23□□□□□ -0.13
SEMA3CQ99985 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA3CQ99985 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA3CQ99985 AC005014.1-201ENST00000432006 2976 ntBASIC14.23□□□□□ -0.13
SEMA3CQ99985 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA3CQ99985 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA3CQ99985 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA3CQ99985 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA3CQ99985 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA3CQ99985 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.23□□□□□ -0.13
SEMA3CQ99985 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.23□□□□□ -0.13
SEMA3CQ99985 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SEMA3CQ99985 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA3CQ99985 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.23□□□□□ -0.13
SEMA3CQ99985 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA3CQ99985 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
SEMA3CQ99985 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA3CQ99985 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA3CQ99985 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.23□□□□□ -0.13
SEMA3CQ99985 KLF17P1-201ENST00000547105 1126 ntBASIC14.23□□□□□ -0.13
SEMA3CQ99985 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.23□□□□□ -0.13
SEMA3CQ99985 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.23□□□□□ -0.13
SEMA3CQ99985 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SEMA3CQ99985 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SEMA3CQ99985 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA3CQ99985 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA3CQ99985 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA3CQ99985 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA3CQ99985 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.23□□□□□ -0.13
SEMA3CQ99985 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.23□□□□□ -0.13
SEMA3CQ99985 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA3CQ99985 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA3CQ99985 SALL4P6-201ENST00000429385 1691 ntBASIC14.23□□□□□ -0.13
SEMA3CQ99985 AC093462.1-201ENST00000621167 1683 ntBASIC14.23□□□□□ -0.13
SEMA3CQ99985 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SEMA3CQ99985 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SEMA3CQ99985 KRT8P18-201ENST00000413425 1445 ntBASIC14.23□□□□□ -0.13
SEMA3CQ99985 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA3CQ99985 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA3CQ99985 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA3CQ99985 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.23□□□□□ -0.13
SEMA3CQ99985 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.23□□□□□ -0.13
SEMA3CQ99985 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.23□□□□□ -0.13
SEMA3CQ99985 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA3CQ99985 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SEMA3CQ99985 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SEMA3CQ99985 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.22□□□□□ -0.13
SEMA3CQ99985 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA3CQ99985 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA3CQ99985 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA3CQ99985 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.22□□□□□ -0.13
SEMA3CQ99985 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.22□□□□□ -0.13
SEMA3CQ99985 NCLP1-201ENST00000445357 1963 ntBASIC14.22□□□□□ -0.13
SEMA3CQ99985 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA3CQ99985 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA3CQ99985 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA3CQ99985 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA3CQ99985 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA3CQ99985 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA3CQ99985 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA3CQ99985 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA3CQ99985 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA3CQ99985 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC14.22□□□□□ -0.13
SEMA3CQ99985 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.22□□□□□ -0.13
SEMA3CQ99985 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA3CQ99985 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.22□□□□□ -0.13
SEMA3CQ99985 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.22□□□□□ -0.13
SEMA3CQ99985 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.22□□□□□ -0.13
SEMA3CQ99985 AC008267.1-201ENST00000474858 1069 ntBASIC14.22□□□□□ -0.13
SEMA3CQ99985 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms