Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AC009560.1-201ENST00000620208 434 ntBASIC14.87□□□□□ -0.03
ATP2A3Q93084 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
ATP2A3Q93084 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
ATP2A3Q93084 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP2A3Q93084 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP2A3Q93084 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ATP2A3Q93084 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP2A3Q93084 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP2A3Q93084 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP2A3Q93084 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
ATP2A3Q93084 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP2A3Q93084 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.87□□□□□ -0.03
ATP2A3Q93084 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.87□□□□□ -0.03
ATP2A3Q93084 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ATP2A3Q93084 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.87□□□□□ -0.03
ATP2A3Q93084 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.87□□□□□ -0.03
ATP2A3Q93084 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
ATP2A3Q93084 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP2A3Q93084 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP2A3Q93084 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP2A3Q93084 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.87□□□□□ -0.03
ATP2A3Q93084 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.87□□□□□ -0.03
ATP2A3Q93084 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ATP2A3Q93084 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP2A3Q93084 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.87□□□□□ -0.03
ATP2A3Q93084 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ATP2A3Q93084 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.86□□□□□ -0.03
ATP2A3Q93084 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
ATP2A3Q93084 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ATP2A3Q93084 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
ATP2A3Q93084 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.86□□□□□ -0.03
ATP2A3Q93084 AP002353.1-201ENST00000528257 1599 ntBASIC14.86□□□□□ -0.03
ATP2A3Q93084 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.86□□□□□ -0.03
ATP2A3Q93084 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP2A3Q93084 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.86□□□□□ -0.03
ATP2A3Q93084 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP2A3Q93084 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP2A3Q93084 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ATP2A3Q93084 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP2A3Q93084 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
ATP2A3Q93084 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP2A3Q93084 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP2A3Q93084 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.86□□□□□ -0.03
ATP2A3Q93084 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC14.86□□□□□ -0.03
ATP2A3Q93084 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC14.86□□□□□ -0.03
ATP2A3Q93084 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ATP2A3Q93084 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.86□□□□□ -0.03
ATP2A3Q93084 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.86□□□□□ -0.03
ATP2A3Q93084 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.86□□□□□ -0.03
ATP2A3Q93084 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.86□□□□□ -0.03
ATP2A3Q93084 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
ATP2A3Q93084 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC14.86□□□□□ -0.03
ATP2A3Q93084 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC14.86□□□□□ -0.03
ATP2A3Q93084 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
ATP2A3Q93084 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
ATP2A3Q93084 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
ATP2A3Q93084 AC090386.2-201ENST00000623010 1039 ntBASIC14.86□□□□□ -0.03
ATP2A3Q93084 AC215219.1-201ENST00000400706 1817 ntBASIC14.86□□□□□ -0.03
ATP2A3Q93084 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP2A3Q93084 AC011498.7-201ENST00000624986 2027 ntBASIC14.86□□□□□ -0.03
ATP2A3Q93084 AC020910.6-201ENST00000623084 1459 ntBASIC14.86□□□□□ -0.03
ATP2A3Q93084 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP2A3Q93084 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP2A3Q93084 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP2A3Q93084 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP2A3Q93084 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP2A3Q93084 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC14.86□□□□□ -0.03
ATP2A3Q93084 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
ATP2A3Q93084 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP2A3Q93084 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ATP2A3Q93084 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP2A3Q93084 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP2A3Q93084 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
ATP2A3Q93084 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
ATP2A3Q93084 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
ATP2A3Q93084 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.85□□□□□ -0.03
ATP2A3Q93084 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
ATP2A3Q93084 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
ATP2A3Q93084 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ATP2A3Q93084 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.85□□□□□ -0.03
ATP2A3Q93084 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.85□□□□□ -0.03
ATP2A3Q93084 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.85□□□□□ -0.03
ATP2A3Q93084 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC14.85□□□□□ -0.03
ATP2A3Q93084 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms